Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.23■□□□□ 0.19
SNAI2O43623 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.23■□□□□ 0.19
SNAI2O43623 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SNAI2O43623 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SNAI2O43623 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.23■□□□□ 0.19
SNAI2O43623 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SNAI2O43623 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
SNAI2O43623 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SNAI2O43623 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.23■□□□□ 0.19
SNAI2O43623 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNAI2O43623 AC087742.1-201ENST00000575880 1738 ntBASIC16.22■□□□□ 0.19
SNAI2O43623 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.22■□□□□ 0.19
SNAI2O43623 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SNAI2O43623 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
SNAI2O43623 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNAI2O43623 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.22■□□□□ 0.19
SNAI2O43623 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.22■□□□□ 0.19
SNAI2O43623 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.22■□□□□ 0.19
SNAI2O43623 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNAI2O43623 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.22■□□□□ 0.19
SNAI2O43623 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.22■□□□□ 0.19
SNAI2O43623 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SNAI2O43623 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNAI2O43623 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNAI2O43623 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNAI2O43623 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.22■□□□□ 0.19
SNAI2O43623 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNAI2O43623 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNAI2O43623 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNAI2O43623 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
SNAI2O43623 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.22■□□□□ 0.19
SNAI2O43623 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNAI2O43623 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.21■□□□□ 0.19
SNAI2O43623 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNAI2O43623 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNAI2O43623 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNAI2O43623 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SNAI2O43623 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.21■□□□□ 0.19
SNAI2O43623 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNAI2O43623 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNAI2O43623 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNAI2O43623 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SNAI2O43623 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.21■□□□□ 0.18
SNAI2O43623 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SNAI2O43623 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SNAI2O43623 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNAI2O43623 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNAI2O43623 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.2■□□□□ 0.18
SNAI2O43623 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.2■□□□□ 0.18
SNAI2O43623 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNAI2O43623 AC138932.1-201ENST00000534164 6830 ntBASIC16.2■□□□□ 0.18
SNAI2O43623 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNAI2O43623 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.2■□□□□ 0.18
SNAI2O43623 AC120024.1-201ENST00000562672 995 ntBASIC16.2■□□□□ 0.18
SNAI2O43623 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.2■□□□□ 0.18
SNAI2O43623 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
SNAI2O43623 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNAI2O43623 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SNAI2O43623 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.2■□□□□ 0.18
SNAI2O43623 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNAI2O43623 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SNAI2O43623 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNAI2O43623 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 AC144652.1-201ENST00000609974 1624 ntBASIC16.19■□□□□ 0.18
SNAI2O43623 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.19■□□□□ 0.18
SNAI2O43623 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SNAI2O43623 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SNAI2O43623 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNAI2O43623 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.19■□□□□ 0.18
SNAI2O43623 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNAI2O43623 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNAI2O43623 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNAI2O43623 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SNAI2O43623 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.18■□□□□ 0.18
SNAI2O43623 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SNAI2O43623 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SNAI2O43623 U85056.1-201ENST00000616429 682 ntBASIC16.18■□□□□ 0.18
SNAI2O43623 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNAI2O43623 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
SNAI2O43623 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNAI2O43623 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.18■□□□□ 0.18
SNAI2O43623 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNAI2O43623 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNAI2O43623 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms