Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF11O14788 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF11O14788 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF11O14788 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF11O14788 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TNFSF11O14788 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF11O14788 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF11O14788 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF11O14788 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.6■□□□□ 0.73
TNFSF11O14788 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF11O14788 IRS3P-201ENST00000223076 1006 ntBASIC19.6■□□□□ 0.73
TNFSF11O14788 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.6■□□□□ 0.73
TNFSF11O14788 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.6■□□□□ 0.73
TNFSF11O14788 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF11O14788 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TNFSF11O14788 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF11O14788 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.6■□□□□ 0.73
TNFSF11O14788 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF11O14788 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.6■□□□□ 0.73
TNFSF11O14788 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFSF11O14788 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFSF11O14788 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFSF11O14788 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFSF11O14788 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFSF11O14788 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
TNFSF11O14788 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFSF11O14788 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF11O14788 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TNFSF11O14788 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF11O14788 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF11O14788 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF11O14788 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF11O14788 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF11O14788 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF11O14788 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.58■□□□□ 0.72
TNFSF11O14788 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TNFSF11O14788 AC087742.1-201ENST00000575880 1738 ntBASIC19.58■□□□□ 0.72
TNFSF11O14788 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF11O14788 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF11O14788 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF11O14788 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF11O14788 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF11O14788 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF11O14788 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.57■□□□□ 0.72
TNFSF11O14788 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TNFSF11O14788 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF11O14788 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.57■□□□□ 0.72
TNFSF11O14788 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.57■□□□□ 0.72
TNFSF11O14788 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF11O14788 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF11O14788 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF11O14788 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TNFSF11O14788 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF11O14788 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TNFSF11O14788 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TNFSF11O14788 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF11O14788 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF11O14788 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TNFSF11O14788 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TNFSF11O14788 MIR572-201ENST00000384983 95 ntBASIC19.56■□□□□ 0.72
TNFSF11O14788 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.56■□□□□ 0.72
TNFSF11O14788 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.56■□□□□ 0.72
TNFSF11O14788 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF11O14788 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.56■□□□□ 0.72
TNFSF11O14788 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF11O14788 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.56■□□□□ 0.72
TNFSF11O14788 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF11O14788 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF11O14788 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF11O14788 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF11O14788 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF11O14788 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
TNFSF11O14788 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF11O14788 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TNFSF11O14788 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TNFSF11O14788 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF11O14788 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF11O14788 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF11O14788 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF11O14788 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TNFSF11O14788 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.55■□□□□ 0.72
TNFSF11O14788 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF11O14788 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF11O14788 OXCT2P1-201ENST00000447263 1535 ntBASIC19.55■□□□□ 0.72
TNFSF11O14788 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.55■□□□□ 0.72
TNFSF11O14788 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF11O14788 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF11O14788 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF11O14788 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
TNFSF11O14788 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF11O14788 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms