Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.79■■□□□ 1.08
COPEO14579 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COPEO14579 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.78■■□□□ 1.08
COPEO14579 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
COPEO14579 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
COPEO14579 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 DUX4L4-201ENST00000566884 1269 ntBASIC21.78■■□□□ 1.08
COPEO14579 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COPEO14579 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.77■■□□□ 1.08
COPEO14579 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COPEO14579 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.77■■□□□ 1.08
COPEO14579 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COPEO14579 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.77■■□□□ 1.08
COPEO14579 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.77■■□□□ 1.08
COPEO14579 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
COPEO14579 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.77■■□□□ 1.08
COPEO14579 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.76■■□□□ 1.07
COPEO14579 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.76■■□□□ 1.07
COPEO14579 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.76■■□□□ 1.07
COPEO14579 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
COPEO14579 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 AC137630.3-201ENST00000607245 391 ntBASIC21.76■■□□□ 1.07
COPEO14579 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
COPEO14579 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
COPEO14579 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.76■■□□□ 1.07
COPEO14579 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.76■■□□□ 1.07
COPEO14579 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
COPEO14579 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COPEO14579 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
COPEO14579 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.75■■□□□ 1.07
COPEO14579 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COPEO14579 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.75■■□□□ 1.07
COPEO14579 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.75■■□□□ 1.07
COPEO14579 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COPEO14579 MIR6722-201ENST00000617286 78 ntBASIC21.75■■□□□ 1.07
COPEO14579 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
COPEO14579 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
COPEO14579 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COPEO14579 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COPEO14579 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.75■■□□□ 1.07
COPEO14579 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
COPEO14579 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COPEO14579 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.74■■□□□ 1.07
COPEO14579 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.74■■□□□ 1.07
COPEO14579 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.74■■□□□ 1.07
COPEO14579 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
COPEO14579 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
COPEO14579 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPEO14579 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPEO14579 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPEO14579 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.73■■□□□ 1.07
COPEO14579 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.73■■□□□ 1.07
COPEO14579 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.73■■□□□ 1.07
COPEO14579 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.73■■□□□ 1.07
COPEO14579 AC103834.1-201ENST00000520383 144 ntBASIC21.73■■□□□ 1.07
COPEO14579 AC103724.3-201ENST00000564481 992 ntBASIC21.73■■□□□ 1.07
COPEO14579 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.73■■□□□ 1.07
COPEO14579 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPEO14579 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COPEO14579 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.73■■□□□ 1.07
COPEO14579 AC004687.1-201ENST00000579003 1625 ntBASIC21.73■■□□□ 1.07
COPEO14579 AC244015.2-201ENST00000616358 1861 ntBASIC21.73■■□□□ 1.07
COPEO14579 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.72■■□□□ 1.07
COPEO14579 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.72■■□□□ 1.07
COPEO14579 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.72■■□□□ 1.07
COPEO14579 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
COPEO14579 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COPEO14579 AC005229.4-201ENST00000610085 2198 ntBASIC21.72■■□□□ 1.07
COPEO14579 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms