Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LINC01548A6NM66 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01548A6NM66 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01548A6NM66 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC01548A6NM66 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC01548A6NM66 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01548A6NM66 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01548A6NM66 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
LINC01548A6NM66 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC01548A6NM66 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01548A6NM66 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LINC01548A6NM66 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01548A6NM66 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01548A6NM66 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LINC01548A6NM66 IRS3P-201ENST00000223076 1006 ntBASIC17.25■□□□□ 0.35
LINC01548A6NM66 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC01548A6NM66 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.25■□□□□ 0.35
LINC01548A6NM66 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01548A6NM66 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC01548A6NM66 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01548A6NM66 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01548A6NM66 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LINC01548A6NM66 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01548A6NM66 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01548A6NM66 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01548A6NM66 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC01548A6NM66 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC01548A6NM66 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC01548A6NM66 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.24■□□□□ 0.35
LINC01548A6NM66 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC01548A6NM66 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC01548A6NM66 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01548A6NM66 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC01548A6NM66 AC068473.5-201ENST00000616428 2072 ntBASIC17.24■□□□□ 0.35
LINC01548A6NM66 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01548A6NM66 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC01548A6NM66 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01548A6NM66 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.23■□□□□ 0.35
LINC01548A6NM66 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC01548A6NM66 AC068587.7-201ENST00000641602 218 ntBASIC17.23■□□□□ 0.35
LINC01548A6NM66 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01548A6NM66 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01548A6NM66 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01548A6NM66 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC01548A6NM66 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01548A6NM66 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LINC01548A6NM66 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
LINC01548A6NM66 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC01548A6NM66 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LINC01548A6NM66 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LINC01548A6NM66 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01548A6NM66 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01548A6NM66 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01548A6NM66 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LINC01548A6NM66 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01548A6NM66 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01548A6NM66 AC010141.3-201ENST00000456659 717 ntBASIC17.22■□□□□ 0.35
LINC01548A6NM66 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC01548A6NM66 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01548A6NM66 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01548A6NM66 AC133561.1-201ENST00000568600 2415 ntBASIC17.22■□□□□ 0.35
LINC01548A6NM66 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LINC01548A6NM66 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LINC01548A6NM66 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 MIR572-201ENST00000384983 95 ntBASIC17.21■□□□□ 0.35
LINC01548A6NM66 MIR935-201ENST00000401179 91 ntBASIC17.21■□□□□ 0.35
LINC01548A6NM66 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
LINC01548A6NM66 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC01548A6NM66 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LINC01548A6NM66 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01548A6NM66 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.21■□□□□ 0.34
LINC01548A6NM66 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LINC01548A6NM66 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LINC01548A6NM66 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01548A6NM66 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01548A6NM66 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01548A6NM66 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC01548A6NM66 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01548A6NM66 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01548A6NM66 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01548A6NM66 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01548A6NM66 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01548A6NM66 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01548A6NM66 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01548A6NM66 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
LINC01548A6NM66 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01548A6NM66 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms