Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM9A6NGZ8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM9A6NGZ8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.77■□□□□ 0.12
SMIM9A6NGZ8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM9A6NGZ8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM9A6NGZ8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.77■□□□□ 0.11
SMIM9A6NGZ8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM9A6NGZ8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM9A6NGZ8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMIM9A6NGZ8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 TSPY26P-201ENST00000476365 1326 ntBASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 OXCT2P1-201ENST00000447263 1535 ntBASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMIM9A6NGZ8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 MIR572-201ENST00000384983 95 ntBASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 AC105265.2-201ENST00000467189 838 ntBASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM9A6NGZ8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 IRS3P-201ENST00000223076 1006 ntBASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM9A6NGZ8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM9A6NGZ8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 AC079089.2-201ENST00000531211 1277 ntBASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 AL358852.1-201ENST00000623174 1268 ntBASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM9A6NGZ8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms