Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.08■□□□□ 0.81
CDHR4A6H8M9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.08■□□□□ 0.81
CDHR4A6H8M9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDHR4A6H8M9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDHR4A6H8M9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.08■□□□□ 0.81
CDHR4A6H8M9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDHR4A6H8M9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDHR4A6H8M9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDHR4A6H8M9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDHR4A6H8M9 C11orf96-202ENST00000528572 1834 ntBASIC20.08■□□□□ 0.8
CDHR4A6H8M9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDHR4A6H8M9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDHR4A6H8M9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.06■□□□□ 0.8
CDHR4A6H8M9 AL031602.1-201ENST00000633169 911 ntBASIC20.06■□□□□ 0.8
CDHR4A6H8M9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.06■□□□□ 0.8
CDHR4A6H8M9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 MIR4466-201ENST00000606121 54 ntBASIC20.05■□□□□ 0.8
CDHR4A6H8M9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.05■□□□□ 0.8
CDHR4A6H8M9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.04■□□□□ 0.8
CDHR4A6H8M9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDHR4A6H8M9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CDHR4A6H8M9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.03■□□□□ 0.8
CDHR4A6H8M9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.03■□□□□ 0.8
CDHR4A6H8M9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDHR4A6H8M9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDHR4A6H8M9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CDHR4A6H8M9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.03■□□□□ 0.8
CDHR4A6H8M9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.03■□□□□ 0.8
CDHR4A6H8M9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms