Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 AC010141.3-201ENST00000456659 717 ntBASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 AL354811.1-201ENST00000610286 706 ntBASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 AC105233.4-201ENST00000642045 216 ntBASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGHV4-28A0A0C4DH34 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 MIR5787-201ENST00000611784 55 ntBASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 MIR6821-201ENST00000617625 74 ntBASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
IGHV4-28A0A0C4DH34 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 AC097381.1-201ENST00000429019 1296 ntBASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGHV4-28A0A0C4DH34 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 AC087623.3-201ENST00000607047 1098 ntBASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 NFE2L3P1-201ENST00000588207 1959 ntBASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.72■□□□□ 0.11
IGHV4-28A0A0C4DH34 LINC01960-201ENST00000563759 1884 ntBASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 YBX1P1-201ENST00000445822 960 ntBASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.71■□□□□ 0.11
IGHV4-28A0A0C4DH34 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms