Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV25A0A0B4J276 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 AC079089.2-201ENST00000531211 1277 ntBASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 AL354811.1-201ENST00000610286 706 ntBASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV25A0A0B4J276 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV25A0A0B4J276 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 ZNRF2P3-201ENST00000424200 374 ntBASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 AC105233.4-201ENST00000642045 216 ntBASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV25A0A0B4J276 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms