Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 AC079140.4-201ENST00000507448 529 ntBASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
TRAV17A0A0B4J275 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRAV17A0A0B4J275 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
TRAV17A0A0B4J275 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV17A0A0B4J275 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV17A0A0B4J275 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAV17A0A0B4J275 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV17A0A0B4J275 BID-214ENST00000617586 542 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV17A0A0B4J275 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV17A0A0B4J275 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV17A0A0B4J275 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV17A0A0B4J275 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV17A0A0B4J275 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV17A0A0B4J275 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV17A0A0B4J275 KRT18P11-201ENST00000435214 1283 ntBASIC19.86■□□□□ 0.77
TRAV17A0A0B4J275 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.86■□□□□ 0.77
TRAV17A0A0B4J275 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV17A0A0B4J275 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV17A0A0B4J275 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TRAV17A0A0B4J275 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 DUSP8P3-201ENST00000399571 1760 ntBASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV17A0A0B4J275 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 AC073111.5-205ENST00000641717 521 ntBASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 AC009237.3-201ENST00000393279 1427 ntBASIC19.84■□□□□ 0.77
TRAV17A0A0B4J275 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV17A0A0B4J275 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAV17A0A0B4J275 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV17A0A0B4J275 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAV17A0A0B4J275 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV17A0A0B4J275 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV17A0A0B4J275 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV17A0A0B4J275 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 CDCA4P2-201ENST00000441182 718 ntBASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 AC026185.1-201ENST00000445748 174 ntBASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV17A0A0B4J275 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV17A0A0B4J275 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV17A0A0B4J275 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV17A0A0B4J275 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAV17A0A0B4J275 HLA-L-209ENST00000420110 1011 ntBASIC19.81■□□□□ 0.76
TRAV17A0A0B4J275 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms