Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 FEM1AP4-201ENST00000443167 1987 ntBASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 AC092296.2-201ENST00000589470 999 ntBASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-1A0A0B4J245 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 RNF165-205ENST00000588679 2904 ntBASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-1A0A0B4J245 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV12-1A0A0B4J245 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 ECEL1P2-201ENST00000461596 1295 ntBASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 RAP2CP1-202ENST00000605179 643 ntBASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-1A0A0B4J245 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 AC144652.1-201ENST00000609974 1624 ntBASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 AC026202.3-201ENST00000600805 1127 ntBASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-1A0A0B4J245 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRAV12-1A0A0B4J245 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV12-1A0A0B4J245 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV12-1A0A0B4J245 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRAV12-1A0A0B4J245 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV12-1A0A0B4J245 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV12-1A0A0B4J245 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV12-1A0A0B4J245 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV12-1A0A0B4J245 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV12-1A0A0B4J245 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms