Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-8A0A0A6YYG3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CLDN5-201ENST00000403084 2357 ntBASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 GUSBP5-201ENST00000418136 578 ntBASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CA15P2-201ENST00000611168 834 ntBASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV6-8A0A0A6YYG3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 MIR3621-201ENST00000580529 85 ntBASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-8A0A0A6YYG3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms