Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 AL158847.1-201ENST00000431955 808 ntTSL 3 BASIC13.32□□□□□ -0.28
MTHFRP42898 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC13.32□□□□□ -0.28
MTHFRP42898 AC109779.1-202ENST00000439810 579 ntTSL 4 BASIC13.32□□□□□ -0.28
MTHFRP42898 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 AC096919.1-201ENST00000472730 652 ntBASIC13.32□□□□□ -0.28
MTHFRP42898 AC016304.1-201ENST00000476363 413 ntBASIC13.32□□□□□ -0.28
MTHFRP42898 TPI1P2-201ENST00000491343 752 ntBASIC13.32□□□□□ -0.28
MTHFRP42898 LINC01324-202ENST00000497379 838 ntTSL 5 BASIC13.32□□□□□ -0.28
MTHFRP42898 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.32□□□□□ -0.28
MTHFRP42898 AC022239.3-201ENST00000528629 544 ntTSL 4 BASIC13.32□□□□□ -0.28
MTHFRP42898 AC104758.3-203ENST00000562938 2123 ntBASIC13.32□□□□□ -0.28
MTHFRP42898 RN7SL732P-201ENST00000581157 300 ntBASIC13.32□□□□□ -0.28
MTHFRP42898 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC13.32□□□□□ -0.28
MTHFRP42898 PRKN-210ENST00000612540 603 ntTSL 5 BASIC13.32□□□□□ -0.28
MTHFRP42898 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC13.32□□□□□ -0.28
MTHFRP42898 CICP9-201ENST00000444451 1913 ntBASIC13.32□□□□□ -0.28
MTHFRP42898 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
MTHFRP42898 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC13.32□□□□□ -0.28
MTHFRP42898 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
MTHFRP42898 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
MTHFRP42898 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MTHFRP42898 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.32□□□□□ -0.28
MTHFRP42898 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
MTHFRP42898 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 AGGF1P10-201ENST00000635005 2191 ntBASIC13.31□□□□□ -0.28
MTHFRP42898 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC107375.1-201ENST00000564464 2231 ntBASIC13.31□□□□□ -0.28
MTHFRP42898 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.31□□□□□ -0.28
MTHFRP42898 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
MTHFRP42898 ART2P-201ENST00000415521 822 ntBASIC13.31□□□□□ -0.28
MTHFRP42898 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 AC004771.2-201ENST00000430920 439 ntTSL 3 BASIC13.31□□□□□ -0.28
MTHFRP42898 TMX3-202ENST00000443099 913 ntTSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 VDAC1P13-201ENST00000447826 859 ntBASIC13.31□□□□□ -0.28
MTHFRP42898 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC104445.1-201ENST00000460597 749 ntTSL 3 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC116553.1-201ENST00000561752 397 ntBASIC13.31□□□□□ -0.28
MTHFRP42898 AC092368.1-201ENST00000568014 733 ntBASIC13.31□□□□□ -0.28
MTHFRP42898 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.31□□□□□ -0.28
MTHFRP42898 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
MTHFRP42898 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MTHFRP42898 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.31□□□□□ -0.28
MTHFRP42898 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.31□□□□□ -0.28
MTHFRP42898 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MTHFRP42898 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 AC018445.4-201ENST00000624066 2291 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 AL645937.6-201ENST00000641122 3727 ntBASIC13.3□□□□□ -0.28
MTHFRP42898 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC13.3□□□□□ -0.28
MTHFRP42898 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MTHFRP42898 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC13.3□□□□□ -0.28
MTHFRP42898 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms