Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 AC090114.2-201ENST00000608477 7054 ntBASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 EME1-207ENST00000511648 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 PRADC1P1-201ENST00000412317 525 ntBASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 AC108734.2-201ENST00000420887 1069 ntBASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 MIR5091-201ENST00000578707 93 ntBASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 TRMT112P3-201ENST00000580149 358 ntBASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 AC073911.3-201ENST00000624401 631 ntBASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 MESD-206ENST00000561312 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 PLEKHG6-204ENST00000449001 3111 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAF6Q9Y4K3 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 EEF1AKMT3-202ENST00000333012 2762 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 LHFPL5-201ENST00000360215 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 KRT8P19-201ENST00000551916 1455 ntBASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 TNFSF13B-202ENST00000430559 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 LILRP2-202ENST00000413572 1383 ntBASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 NF2-207ENST00000397789 1857 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 IDS-203ENST00000428056 1213 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AC106872.8-201ENST00000507651 684 ntBASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AC093826.1-201ENST00000508655 993 ntBASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AC079328.1-201ENST00000560358 952 ntBASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AC104440.1-201ENST00000605010 343 ntBASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 AC008663.2-201ENST00000517299 1777 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 RCAN2-202ENST00000330430 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 HSD3B1-201ENST00000369413 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 GRHL3-202ENST00000350501 2119 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAF6Q9Y4K3 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms