Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AL049597.1-201ENST00000447415 555 ntBASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 RHOQP2-201ENST00000449922 579 ntBASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 TPT1P6-201ENST00000458298 514 ntBASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AADAC-202ENST00000488869 719 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AC011431.1-201ENST00000512971 230 ntBASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AP003040.1-201ENST00000532044 1024 ntBASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 ACTBP9-201ENST00000587663 1099 ntBASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AL590556.2-202ENST00000636906 844 ntBASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NPIPA3F8WFD2 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 FAU-201ENST00000279259 461 ntTSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 OR7E122P-201ENST00000383606 1017 ntBASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 NAA10-205ENST00000393712 908 ntTSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 RPSAP61-201ENST00000412542 878 ntBASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 OR4C14P-201ENST00000440929 923 ntBASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 HAX1-211ENST00000532105 771 ntTSL 3 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 INO80E-209ENST00000567254 625 ntTSL 2 BASIC11.73□□□□□ -0.53
NPIPA3F8WFD2 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms