Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SLC1A1P43005 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC1A1P43005 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
SLC1A1P43005 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 MSR1-205ENST00000445506 1513 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SLC1A1P43005 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SLC1A1P43005 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC1A1P43005 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC1A1P43005 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.46□□□□□ -0.25
SLC1A1P43005 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.46□□□□□ -0.25
SLC1A1P43005 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC13.46□□□□□ -0.25
SLC1A1P43005 AC084752.1-201ENST00000509766 622 ntBASIC13.46□□□□□ -0.25
SLC1A1P43005 AC079328.1-201ENST00000560358 952 ntBASIC13.46□□□□□ -0.25
SLC1A1P43005 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SLC1A1P43005 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC13.46□□□□□ -0.25
SLC1A1P43005 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.46□□□□□ -0.25
SLC1A1P43005 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.46□□□□□ -0.25
SLC1A1P43005 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC1A1P43005 URAHP-205ENST00000610227 398 ntBASIC13.46□□□□□ -0.25
SLC1A1P43005 MIR6746-201ENST00000620971 63 ntBASIC13.46□□□□□ -0.25
SLC1A1P43005 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC1A1P43005 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.46□□□□□ -0.25
SLC1A1P43005 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC13.46□□□□□ -0.25
SLC1A1P43005 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SLC1A1P43005 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC1A1P43005 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
SLC1A1P43005 HSD3B1-201ENST00000369413 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC1A1P43005 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC13.46□□□□□ -0.26
SLC1A1P43005 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SLC1A1P43005 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SLC1A1P43005 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC13.46□□□□□ -0.26
SLC1A1P43005 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC1A1P43005 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC1A1P43005 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.26
SLC1A1P43005 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SLC1A1P43005 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC13.46□□□□□ -0.26
SLC1A1P43005 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC1A1P43005 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SLC1A1P43005 FAM90A6P-201ENST00000515148 1394 ntBASIC13.45□□□□□ -0.26
SLC1A1P43005 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC1A1P43005 FKBP4P8-201ENST00000610931 1369 ntBASIC13.45□□□□□ -0.26
SLC1A1P43005 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 MTMR2-202ENST00000352297 3350 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SLC1A1P43005 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC1A1P43005 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC1A1P43005 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC1A1P43005 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
SLC1A1P43005 AC024475.2-201ENST00000312173 879 ntBASIC13.45□□□□□ -0.26
SLC1A1P43005 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC13.45□□□□□ -0.26
SLC1A1P43005 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 LDHBP1-201ENST00000455730 1119 ntBASIC13.45□□□□□ -0.26
SLC1A1P43005 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC1A1P43005 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC1A1P43005 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC13.45□□□□□ -0.26
SLC1A1P43005 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.45□□□□□ -0.26
SLC1A1P43005 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
SLC1A1P43005 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 AC016629.1-201ENST00000596579 586 ntBASIC13.45□□□□□ -0.26
SLC1A1P43005 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.45□□□□□ -0.26
SLC1A1P43005 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC1A1P43005 AC006483.2-201ENST00000609813 515 ntBASIC13.45□□□□□ -0.26
SLC1A1P43005 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.45□□□□□ -0.26
SLC1A1P43005 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC1A1P43005 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC1A1P43005 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC1A1P43005 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC1A1P43005 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SLC1A1P43005 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 IFT74-201ENST00000380062 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC1A1P43005 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms