Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PRPS2-202ENST00000380668 2511 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 PRAMEF14-201ENST00000334600 1690 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 KRT8P15-201ENST00000425226 1451 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 TNKS-213ENST00000522110 2900 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 AL357563.1-201ENST00000404728 395 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 GAPDHP67-201ENST00000422905 788 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.22□□□□□ -0.45
SCN2BO60939 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.22□□□□□ -0.45
SCN2BO60939 RPL7P35-201ENST00000446943 740 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 FTLP1-201ENST00000449155 526 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC12.22□□□□□ -0.45
SCN2BO60939 P2RX6P-202ENST00000450626 357 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SCN2BO60939 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 AC092903.1-201ENST00000466506 262 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
SCN2BO60939 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC12.22□□□□□ -0.45
SCN2BO60939 MIR5091-201ENST00000578707 93 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.22□□□□□ -0.45
SCN2BO60939 AC011458.2-201ENST00000603937 207 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.22□□□□□ -0.45
SCN2BO60939 MIR6858-201ENST00000620733 67 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 AC128714.1-201ENST00000637035 887 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 HLA-C-210ENST00000640219 976 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 RPL13AP17-204ENST00000450028 1895 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SCN2BO60939 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 BX537318.2-201ENST00000624893 4162 ntBASIC12.22□□□□□ -0.45
SCN2BO60939 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 PTPRD-AS2-201ENST00000429581 2838 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.22□□□□□ -0.45
SCN2BO60939 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
SCN2BO60939 FMO3-201ENST00000367755 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCN2BO60939 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
SCN2BO60939 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.21□□□□□ -0.45
SCN2BO60939 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
SCN2BO60939 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.21□□□□□ -0.45
SCN2BO60939 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 FAM170A-206ENST00000613773 1374 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 AC006480.2-201ENST00000609770 1337 ntBASIC12.21□□□□□ -0.45
SCN2BO60939 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SCN2BO60939 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCN2BO60939 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC12.21□□□□□ -0.45
SCN2BO60939 RNA5SP248-201ENST00000365602 127 ntBASIC12.21□□□□□ -0.45
SCN2BO60939 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
SCN2BO60939 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms