Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.74□□□□□ -0.21
O00370 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 DDX11L8-201ENST00000535849 366 ntBASIC13.74□□□□□ -0.21
O00370 ABHD17AP9-201ENST00000561925 548 ntBASIC13.74□□□□□ -0.21
O00370 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.74□□□□□ -0.21
O00370 AC104440.1-201ENST00000605010 343 ntBASIC13.74□□□□□ -0.21
O00370 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC13.74□□□□□ -0.21
O00370 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.74□□□□□ -0.21
O00370 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 AL162615.1-201ENST00000429893 1653 ntBASIC13.74□□□□□ -0.21
O00370 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
O00370 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
O00370 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC13.74□□□□□ -0.21
O00370 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.74□□□□□ -0.21
O00370 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC13.74□□□□□ -0.21
O00370 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC13.73□□□□□ -0.21
O00370 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
O00370 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
O00370 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
O00370 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
O00370 LINC01227-205ENST00000567317 1338 ntTSL 2 BASIC13.73□□□□□ -0.21
O00370 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 CSPG4P11-201ENST00000560634 4910 ntBASIC13.73□□□□□ -0.21
O00370 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC13.73□□□□□ -0.21
O00370 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC13.73□□□□□ -0.21
O00370 AC105443.1-201ENST00000433754 712 ntBASIC13.73□□□□□ -0.21
O00370 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.73□□□□□ -0.21
O00370 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 IGHEP2-201ENST00000519308 1256 ntBASIC13.73□□□□□ -0.21
O00370 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
O00370 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.73□□□□□ -0.21
O00370 AC079414.2-201ENST00000567157 1104 ntBASIC13.73□□□□□ -0.21
O00370 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC13.73□□□□□ -0.21
O00370 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC13.73□□□□□ -0.21
O00370 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC13.73□□□□□ -0.21
O00370 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC13.73□□□□□ -0.21
O00370 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC13.73□□□□□ -0.21
O00370 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC13.73□□□□□ -0.21
O00370 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC13.73□□□□□ -0.21
O00370 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC13.73□□□□□ -0.21
O00370 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
O00370 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC13.73□□□□□ -0.21
O00370 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC13.73□□□□□ -0.21
O00370 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
O00370 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC13.73□□□□□ -0.21
O00370 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC13.73□□□□□ -0.21
O00370 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC13.72□□□□□ -0.21
O00370 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 UBE2V1-207ENST00000420027 1956 ntTSL 5 BASIC13.72□□□□□ -0.21
O00370 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC13.72□□□□□ -0.21
O00370 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
O00370 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
O00370 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
O00370 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC13.72□□□□□ -0.21
O00370 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
O00370 KRT19P4-201ENST00000443208 943 ntBASIC13.72□□□□□ -0.21
O00370 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13.72□□□□□ -0.21
O00370 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms