Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.21■□□□□ 0.35
S4R3C0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.21■□□□□ 0.35
S4R3C0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.21■□□□□ 0.35
S4R3C0 AC131281.2-201ENST00000520478 145 ntBASIC17.21■□□□□ 0.35
S4R3C0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 pRNA.6-201ENST00000610482 90 ntBASIC17.21■□□□□ 0.35
S4R3C0 pRNA.5-201ENST00000612139 90 ntBASIC17.21■□□□□ 0.35
S4R3C0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 pRNA.11-201ENST00000618423 90 ntBASIC17.21■□□□□ 0.35
S4R3C0 pRNA.13-201ENST00000619112 90 ntBASIC17.21■□□□□ 0.35
S4R3C0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S4R3C0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
S4R3C0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
S4R3C0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
S4R3C0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.2■□□□□ 0.34
S4R3C0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.2■□□□□ 0.34
S4R3C0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
S4R3C0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
S4R3C0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
S4R3C0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.2■□□□□ 0.34
S4R3C0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
S4R3C0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
S4R3C0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
S4R3C0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.2■□□□□ 0.34
S4R3C0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
S4R3C0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
S4R3C0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
S4R3C0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.2■□□□□ 0.34
S4R3C0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.2■□□□□ 0.34
S4R3C0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.2■□□□□ 0.34
S4R3C0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
S4R3C0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.19■□□□□ 0.34
S4R3C0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.19■□□□□ 0.34
S4R3C0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
S4R3C0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.19■□□□□ 0.34
S4R3C0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
S4R3C0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.19■□□□□ 0.34
S4R3C0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.19■□□□□ 0.34
S4R3C0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.19■□□□□ 0.34
S4R3C0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.19■□□□□ 0.34
S4R3C0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.19■□□□□ 0.34
S4R3C0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.19■□□□□ 0.34
S4R3C0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
S4R3C0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
S4R3C0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
S4R3C0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
S4R3C0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.19■□□□□ 0.34
S4R3C0 AC080038.3-201ENST00000623346 1952 ntBASIC17.19■□□□□ 0.34
S4R3C0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
S4R3C0 AC087742.1-201ENST00000575880 1738 ntBASIC17.18■□□□□ 0.34
S4R3C0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
S4R3C0 LINC01960-201ENST00000563759 1884 ntBASIC17.18■□□□□ 0.34
S4R3C0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
S4R3C0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.18■□□□□ 0.34
S4R3C0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
S4R3C0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
S4R3C0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.18■□□□□ 0.34
S4R3C0 AC241377.3-202ENST00000626088 1088 ntBASIC17.18■□□□□ 0.34
S4R3C0 AC241585.3-202ENST00000628937 1088 ntBASIC17.18■□□□□ 0.34
S4R3C0 AC245100.8-202ENST00000629247 1058 ntBASIC17.18■□□□□ 0.34
S4R3C0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
S4R3C0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
S4R3C0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
S4R3C0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
S4R3C0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
S4R3C0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
S4R3C0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
S4R3C0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.17■□□□□ 0.34
S4R3C0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
S4R3C0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
S4R3C0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
S4R3C0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
S4R3C0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
S4R3C0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms