Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01558Q9Y6Z2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01558Q9Y6Z2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01558Q9Y6Z2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01558Q9Y6Z2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
LINC01558Q9Y6Z2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01558Q9Y6Z2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 MIR6089-201ENST00000616698 64 ntBASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 AC020916.1-201ENST00000587762 1774 ntBASIC11.44□□□□□ -0.58
LINC01558Q9Y6Z2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01558Q9Y6Z2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 AC010542.4-201ENST00000563151 1910 ntBASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01558Q9Y6Z2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 AC005082.1-201ENST00000413042 2259 ntBASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 SMG8-203ENST00000578922 2178 ntBASIC11.41□□□□□ -0.58
LINC01558Q9Y6Z2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms