Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 AL161729.1-201ENST00000604104 1402 ntBASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 AC135279.3-201ENST00000610945 1311 ntBASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 SUDS3P1-201ENST00000505831 966 ntBASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 AC142381.2-201ENST00000566120 298 ntBASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX49Q9Y6V7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX49Q9Y6V7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX49Q9Y6V7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
DDX49Q9Y6V7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX49Q9Y6V7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
DDX49Q9Y6V7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
DDX49Q9Y6V7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.07■■□□□ 1.76
DDX49Q9Y6V7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX49Q9Y6V7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX49Q9Y6V7 ESRRAP2-201ENST00000418437 1549 ntBASIC26.06■■□□□ 1.76
DDX49Q9Y6V7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX49Q9Y6V7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX49Q9Y6V7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC26.06■■□□□ 1.76
DDX49Q9Y6V7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX49Q9Y6V7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX49Q9Y6V7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 AC009102.2-201ENST00000606772 1639 ntBASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.05■■□□□ 1.76
DDX49Q9Y6V7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
DDX49Q9Y6V7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms