Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 AC104564.3-201ENST00000582367 638 ntBASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HRH3Q9Y5N1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HRH3Q9Y5N1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HRH3Q9Y5N1 BX842568.3-201ENST00000418104 571 ntBASIC20.18■□□□□ 0.82
HRH3Q9Y5N1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HRH3Q9Y5N1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.18■□□□□ 0.82
HRH3Q9Y5N1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.18■□□□□ 0.82
HRH3Q9Y5N1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HRH3Q9Y5N1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 DUSP8P5-201ENST00000422884 1815 ntBASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.17■□□□□ 0.82
HRH3Q9Y5N1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
HRH3Q9Y5N1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HRH3Q9Y5N1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HRH3Q9Y5N1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HRH3Q9Y5N1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.16■□□□□ 0.82
HRH3Q9Y5N1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HRH3Q9Y5N1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HRH3Q9Y5N1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.16■□□□□ 0.82
HRH3Q9Y5N1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.15■□□□□ 0.82
HRH3Q9Y5N1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
HRH3Q9Y5N1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.14■□□□□ 0.81
HRH3Q9Y5N1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HRH3Q9Y5N1 AL162430.1-201ENST00000480705 870 ntBASIC20.14■□□□□ 0.81
HRH3Q9Y5N1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HRH3Q9Y5N1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.14■□□□□ 0.81
HRH3Q9Y5N1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.14■□□□□ 0.81
HRH3Q9Y5N1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 OR2I1P-207ENST00000453522 948 ntBASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
HRH3Q9Y5N1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
HRH3Q9Y5N1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.11■□□□□ 0.81
HRH3Q9Y5N1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
HRH3Q9Y5N1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HRH3Q9Y5N1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HRH3Q9Y5N1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.11■□□□□ 0.81
HRH3Q9Y5N1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HRH3Q9Y5N1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HRH3Q9Y5N1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms