Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 PBX2P1-201ENST00000493219 1291 ntBASIC23.84■■□□□ 1.41
GCNT4Q9P109 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
GCNT4Q9P109 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
GCNT4Q9P109 AL499627.2-201ENST00000606283 725 ntBASIC23.84■■□□□ 1.41
GCNT4Q9P109 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
GCNT4Q9P109 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GCNT4Q9P109 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GCNT4Q9P109 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GCNT4Q9P109 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
GCNT4Q9P109 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
GCNT4Q9P109 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
GCNT4Q9P109 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GCNT4Q9P109 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GCNT4Q9P109 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GCNT4Q9P109 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GCNT4Q9P109 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
GCNT4Q9P109 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.83■■□□□ 1.41
GCNT4Q9P109 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GCNT4Q9P109 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
GCNT4Q9P109 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
GCNT4Q9P109 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
GCNT4Q9P109 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
GCNT4Q9P109 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
GCNT4Q9P109 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
GCNT4Q9P109 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
GCNT4Q9P109 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GCNT4Q9P109 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
GCNT4Q9P109 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.82■■□□□ 1.4
GCNT4Q9P109 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.82■■□□□ 1.4
GCNT4Q9P109 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GCNT4Q9P109 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.82■■□□□ 1.4
GCNT4Q9P109 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GCNT4Q9P109 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.82■■□□□ 1.4
GCNT4Q9P109 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GCNT4Q9P109 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GCNT4Q9P109 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GCNT4Q9P109 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GCNT4Q9P109 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
GCNT4Q9P109 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GCNT4Q9P109 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GCNT4Q9P109 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.81■■□□□ 1.4
GCNT4Q9P109 AC099791.2-201ENST00000605725 427 ntBASIC23.81■■□□□ 1.4
GCNT4Q9P109 AL136162.1-201ENST00000607711 1078 ntBASIC23.81■■□□□ 1.4
GCNT4Q9P109 AC139530.1-201ENST00000575312 1977 ntBASIC23.81■■□□□ 1.4
GCNT4Q9P109 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
GCNT4Q9P109 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GCNT4Q9P109 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GCNT4Q9P109 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GCNT4Q9P109 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
GCNT4Q9P109 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GCNT4Q9P109 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.8■■□□□ 1.4
GCNT4Q9P109 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.8■■□□□ 1.4
GCNT4Q9P109 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
GCNT4Q9P109 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.8■■□□□ 1.4
GCNT4Q9P109 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
GCNT4Q9P109 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
GCNT4Q9P109 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.79■■□□□ 1.4
GCNT4Q9P109 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
GCNT4Q9P109 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.79■■□□□ 1.4
GCNT4Q9P109 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
GCNT4Q9P109 MIR935-201ENST00000401179 91 ntBASIC23.79■■□□□ 1.4
GCNT4Q9P109 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.79■■□□□ 1.4
GCNT4Q9P109 AL031432.3-201ENST00000607698 485 ntBASIC23.79■■□□□ 1.4
GCNT4Q9P109 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.79■■□□□ 1.4
GCNT4Q9P109 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.79■■□□□ 1.4
GCNT4Q9P109 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.79■■□□□ 1.4
GCNT4Q9P109 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
GCNT4Q9P109 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
GCNT4Q9P109 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GCNT4Q9P109 pRNA.6-201ENST00000610482 90 ntBASIC23.78■■□□□ 1.4
GCNT4Q9P109 pRNA.5-201ENST00000612139 90 ntBASIC23.78■■□□□ 1.4
GCNT4Q9P109 pRNA.11-201ENST00000618423 90 ntBASIC23.78■■□□□ 1.4
GCNT4Q9P109 pRNA.13-201ENST00000619112 90 ntBASIC23.78■■□□□ 1.4
GCNT4Q9P109 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
GCNT4Q9P109 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GCNT4Q9P109 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.78■■□□□ 1.4
GCNT4Q9P109 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
GCNT4Q9P109 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
GCNT4Q9P109 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GCNT4Q9P109 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GCNT4Q9P109 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GCNT4Q9P109 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
GCNT4Q9P109 AC024257.2-201ENST00000549699 147 ntBASIC23.77■■□□□ 1.4
GCNT4Q9P109 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
GCNT4Q9P109 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GCNT4Q9P109 AC135279.3-201ENST00000610945 1311 ntBASIC23.77■■□□□ 1.4
GCNT4Q9P109 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GCNT4Q9P109 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
GCNT4Q9P109 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.77■■□□□ 1.4
GCNT4Q9P109 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms