Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLN6Q9NWW5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLN6Q9NWW5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.94■□□□□ 0.78
CLN6Q9NWW5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLN6Q9NWW5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLN6Q9NWW5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLN6Q9NWW5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 SLC25A24-204ENST00000569674 2357 ntBASIC19.93■□□□□ 0.78
CLN6Q9NWW5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLN6Q9NWW5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CLN6Q9NWW5 AF131216.4-201ENST00000638924 1588 ntBASIC19.91■□□□□ 0.78
CLN6Q9NWW5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 DUX4L18-201ENST00000553347 1267 ntBASIC19.91■□□□□ 0.78
CLN6Q9NWW5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLN6Q9NWW5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLN6Q9NWW5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CLN6Q9NWW5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLN6Q9NWW5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 KRT18P24-201ENST00000344739 1156 ntBASIC19.89■□□□□ 0.77
CLN6Q9NWW5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.89■□□□□ 0.77
CLN6Q9NWW5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 MIR4281-201ENST00000580852 62 ntBASIC19.88■□□□□ 0.77
CLN6Q9NWW5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLN6Q9NWW5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CLN6Q9NWW5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLN6Q9NWW5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.87■□□□□ 0.77
CLN6Q9NWW5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLN6Q9NWW5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLN6Q9NWW5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.87■□□□□ 0.77
CLN6Q9NWW5 THA1P-201ENST00000590384 1145 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms