Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 AC091305.1-201ENST00000479476 895 ntBASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 AP005435.1-201ENST00000529293 1178 ntBASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 AP001330.3-201ENST00000520123 633 ntBASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 AF213884.3-201ENST00000563833 479 ntBASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 RASA4CP-201ENST00000424092 1398 ntBASIC20.05■□□□□ 0.8
SDHAF3Q9NRP4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 MIR939-201ENST00000401314 82 ntBASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 AC099791.1-201ENST00000416440 715 ntBASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 SUDS3P1-201ENST00000505831 966 ntBASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 AC010525.1-201ENST00000585559 441 ntBASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 AL136967.2-201ENST00000623968 743 ntBASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SDHAF3Q9NRP4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 LINC01960-201ENST00000563759 1884 ntBASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 AL031432.3-201ENST00000607698 485 ntBASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SDHAF3Q9NRP4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 AL031602.1-201ENST00000633169 911 ntBASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SDHAF3Q9NRP4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SDHAF3Q9NRP4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.01■□□□□ 0.79
SDHAF3Q9NRP4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 CA15P2-201ENST00000611168 834 ntBASIC20■□□□□ 0.79
SDHAF3Q9NRP4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SDHAF3Q9NRP4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms