Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX4Q9NQI0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.11■■□□□ 1.77
DDX4Q9NQI0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX4Q9NQI0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.11■■□□□ 1.77
DDX4Q9NQI0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.11■■□□□ 1.77
DDX4Q9NQI0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.1■■□□□ 1.77
DDX4Q9NQI0 ANOS2P-203ENST00000472227 1816 ntBASIC26.1■■□□□ 1.77
DDX4Q9NQI0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX4Q9NQI0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.1■■□□□ 1.77
DDX4Q9NQI0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX4Q9NQI0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX4Q9NQI0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.1■■□□□ 1.77
DDX4Q9NQI0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX4Q9NQI0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.09■■□□□ 1.77
DDX4Q9NQI0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.09■■□□□ 1.77
DDX4Q9NQI0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.09■■□□□ 1.77
DDX4Q9NQI0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.09■■□□□ 1.77
DDX4Q9NQI0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.09■■□□□ 1.77
DDX4Q9NQI0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.09■■□□□ 1.77
DDX4Q9NQI0 DUSP8P3-201ENST00000399571 1760 ntBASIC26.09■■□□□ 1.77
DDX4Q9NQI0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.09■■□□□ 1.77
DDX4Q9NQI0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.08■■□□□ 1.77
DDX4Q9NQI0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.08■■□□□ 1.76
DDX4Q9NQI0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.08■■□□□ 1.76
DDX4Q9NQI0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
DDX4Q9NQI0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.07■■□□□ 1.76
DDX4Q9NQI0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX4Q9NQI0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX4Q9NQI0 AC004854.2-201ENST00000608450 1441 ntBASIC26.07■■□□□ 1.76
DDX4Q9NQI0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DDX4Q9NQI0 AP004607.4-201ENST00000530158 1459 ntBASIC26.07■■□□□ 1.76
DDX4Q9NQI0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DDX4Q9NQI0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.07■■□□□ 1.76
DDX4Q9NQI0 OXCT2P1-201ENST00000447263 1535 ntBASIC26.07■■□□□ 1.76
DDX4Q9NQI0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX4Q9NQI0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX4Q9NQI0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 AC087239.1-201ENST00000622671 572 ntBASIC26.05■■□□□ 1.76
DDX4Q9NQI0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
DDX4Q9NQI0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
DDX4Q9NQI0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX4Q9NQI0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX4Q9NQI0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
DDX4Q9NQI0 AC006015.1-201ENST00000429970 570 ntBASIC26.04■■□□□ 1.76
DDX4Q9NQI0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX4Q9NQI0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
DDX4Q9NQI0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
DDX4Q9NQI0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.04■■□□□ 1.76
DDX4Q9NQI0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
DDX4Q9NQI0 AC092068.2-201ENST00000590491 1708 ntBASIC26.03■■□□□ 1.76
DDX4Q9NQI0 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.03■■□□□ 1.76
DDX4Q9NQI0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.03■■□□□ 1.76
DDX4Q9NQI0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.03■■□□□ 1.76
DDX4Q9NQI0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.03■■□□□ 1.76
DDX4Q9NQI0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
DDX4Q9NQI0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.03■■□□□ 1.76
DDX4Q9NQI0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.03■■□□□ 1.76
DDX4Q9NQI0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.03■■□□□ 1.76
DDX4Q9NQI0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX4Q9NQI0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.02■■□□□ 1.76
DDX4Q9NQI0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.02■■□□□ 1.76
DDX4Q9NQI0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.02■■□□□ 1.76
DDX4Q9NQI0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.02■■□□□ 1.76
DDX4Q9NQI0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX4Q9NQI0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX4Q9NQI0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX4Q9NQI0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX4Q9NQI0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms