Protein–RNA interactions for Protein: Q9HD33

MRPL47, 39S ribosomal protein L47, mitochondrial, humanhuman

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47Q9HD33 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MRPL47Q9HD33 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MRPL47Q9HD33 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 pRNA.6-201ENST00000610482 90 ntBASIC23.09■■□□□ 1.29
MRPL47Q9HD33 CA15P2-201ENST00000611168 834 ntBASIC23.09■■□□□ 1.29
MRPL47Q9HD33 pRNA.5-201ENST00000612139 90 ntBASIC23.09■■□□□ 1.29
MRPL47Q9HD33 pRNA.11-201ENST00000618423 90 ntBASIC23.09■■□□□ 1.29
MRPL47Q9HD33 pRNA.13-201ENST00000619112 90 ntBASIC23.09■■□□□ 1.29
MRPL47Q9HD33 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
MRPL47Q9HD33 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.08■■□□□ 1.29
MRPL47Q9HD33 AC133637.1-201ENST00000624115 1537 ntBASIC23.08■■□□□ 1.29
MRPL47Q9HD33 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
MRPL47Q9HD33 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MRPL47Q9HD33 AC006455.2-201ENST00000429931 906 ntBASIC23.08■■□□□ 1.29
MRPL47Q9HD33 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MRPL47Q9HD33 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.08■■□□□ 1.29
MRPL47Q9HD33 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
MRPL47Q9HD33 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MRPL47Q9HD33 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
MRPL47Q9HD33 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MRPL47Q9HD33 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MRPL47Q9HD33 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.08■■□□□ 1.28
MRPL47Q9HD33 AC137767.1-201ENST00000602918 1920 ntBASIC23.08■■□□□ 1.28
MRPL47Q9HD33 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
MRPL47Q9HD33 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MRPL47Q9HD33 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.07■■□□□ 1.28
MRPL47Q9HD33 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
MRPL47Q9HD33 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MRPL47Q9HD33 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MRPL47Q9HD33 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
MRPL47Q9HD33 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MRPL47Q9HD33 C11orf96-202ENST00000528572 1834 ntBASIC23.05■■□□□ 1.28
MRPL47Q9HD33 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 AL512631.2-201ENST00000604634 923 ntBASIC23.05■■□□□ 1.28
MRPL47Q9HD33 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.05■■□□□ 1.28
MRPL47Q9HD33 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
MRPL47Q9HD33 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
MRPL47Q9HD33 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms