Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 IKBKGP1-201ENST00000612193 1073 ntBASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.67■□□□□ 0.74
KIAA1549Q9HCM3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 KRT18P5-201ENST00000436075 1291 ntBASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 AC068473.5-201ENST00000616428 2072 ntBASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
KIAA1549Q9HCM3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KIAA1549Q9HCM3 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.64■□□□□ 0.74
KIAA1549Q9HCM3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KIAA1549Q9HCM3 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.64■□□□□ 0.74
KIAA1549Q9HCM3 AL358852.1-201ENST00000623174 1268 ntBASIC19.64■□□□□ 0.74
KIAA1549Q9HCM3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KIAA1549Q9HCM3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KIAA1549Q9HCM3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KIAA1549Q9HCM3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
KIAA1549Q9HCM3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.64■□□□□ 0.73
KIAA1549Q9HCM3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
KIAA1549Q9HCM3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KIAA1549Q9HCM3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.64■□□□□ 0.73
KIAA1549Q9HCM3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.64■□□□□ 0.73
KIAA1549Q9HCM3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 AP005435.1-201ENST00000529293 1178 ntBASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 KRT18P14-201ENST00000534205 1250 ntBASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.63■□□□□ 0.73
KIAA1549Q9HCM3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KIAA1549Q9HCM3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KIAA1549Q9HCM3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms