Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.98■■□□□ 1.11
VPS11Q9H270 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VPS11Q9H270 LINC01529-204ENST00000636474 1715 ntBASIC21.98■■□□□ 1.11
VPS11Q9H270 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS11Q9H270 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS11Q9H270 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.98■■□□□ 1.11
VPS11Q9H270 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.98■■□□□ 1.11
VPS11Q9H270 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
VPS11Q9H270 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS11Q9H270 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS11Q9H270 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS11Q9H270 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS11Q9H270 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.97■■□□□ 1.11
VPS11Q9H270 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS11Q9H270 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS11Q9H270 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS11Q9H270 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS11Q9H270 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS11Q9H270 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
VPS11Q9H270 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS11Q9H270 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS11Q9H270 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS11Q9H270 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS11Q9H270 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS11Q9H270 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS11Q9H270 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
VPS11Q9H270 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS11Q9H270 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS11Q9H270 MIR6722-201ENST00000617286 78 ntBASIC21.96■■□□□ 1.11
VPS11Q9H270 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS11Q9H270 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS11Q9H270 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS11Q9H270 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS11Q9H270 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS11Q9H270 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
VPS11Q9H270 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS11Q9H270 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.95■■□□□ 1.1
VPS11Q9H270 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS11Q9H270 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
VPS11Q9H270 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
VPS11Q9H270 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS11Q9H270 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS11Q9H270 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
VPS11Q9H270 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.94■■□□□ 1.1
VPS11Q9H270 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.94■■□□□ 1.1
VPS11Q9H270 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS11Q9H270 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS11Q9H270 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS11Q9H270 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
VPS11Q9H270 AC021242.3-201ENST00000607598 1377 ntBASIC21.94■■□□□ 1.1
VPS11Q9H270 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS11Q9H270 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS11Q9H270 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS11Q9H270 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS11Q9H270 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
VPS11Q9H270 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS11Q9H270 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS11Q9H270 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS11Q9H270 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS11Q9H270 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS11Q9H270 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS11Q9H270 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS11Q9H270 BX664725.1-201ENST00000438252 379 ntBASIC21.93■■□□□ 1.1
VPS11Q9H270 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
VPS11Q9H270 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS11Q9H270 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS11Q9H270 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS11Q9H270 FP325331.1-202ENST00000623531 1380 ntBASIC21.93■■□□□ 1.1
VPS11Q9H270 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS11Q9H270 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VPS11Q9H270 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VPS11Q9H270 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS11Q9H270 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS11Q9H270 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VPS11Q9H270 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS11Q9H270 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS11Q9H270 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS11Q9H270 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS11Q9H270 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.92■■□□□ 1.1
VPS11Q9H270 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.92■■□□□ 1.1
VPS11Q9H270 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS11Q9H270 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS11Q9H270 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS11Q9H270 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS11Q9H270 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.91■■□□□ 1.1
VPS11Q9H270 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
VPS11Q9H270 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.91■■□□□ 1.1
VPS11Q9H270 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.91■■□□□ 1.1
VPS11Q9H270 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS11Q9H270 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms