Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTBN4Q9H254 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SPTBN4Q9H254 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.34■■□□□ 1.01
SPTBN4Q9H254 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.34■■□□□ 1.01
SPTBN4Q9H254 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTBN4Q9H254 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTBN4Q9H254 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SPTBN4Q9H254 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTBN4Q9H254 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SPTBN4Q9H254 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTBN4Q9H254 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.33■■□□□ 1
SPTBN4Q9H254 SNORA78-201ENST00000459373 127 ntBASIC21.33■■□□□ 1
SPTBN4Q9H254 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.33■■□□□ 1
SPTBN4Q9H254 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.33■■□□□ 1
SPTBN4Q9H254 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.33■■□□□ 1
SPTBN4Q9H254 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.33■■□□□ 1
SPTBN4Q9H254 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.33■■□□□ 1
SPTBN4Q9H254 AC139426.1-201ENST00000568218 2529 ntBASIC21.32■■□□□ 1
SPTBN4Q9H254 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SPTBN4Q9H254 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.32■■□□□ 1
SPTBN4Q9H254 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.32■■□□□ 1
SPTBN4Q9H254 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SPTBN4Q9H254 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPTBN4Q9H254 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SPTBN4Q9H254 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.32■■□□□ 1
SPTBN4Q9H254 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SPTBN4Q9H254 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPTBN4Q9H254 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPTBN4Q9H254 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPTBN4Q9H254 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.31■■□□□ 1
SPTBN4Q9H254 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SPTBN4Q9H254 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
SPTBN4Q9H254 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPTBN4Q9H254 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.31■■□□□ 1
SPTBN4Q9H254 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SPTBN4Q9H254 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.31■■□□□ 1
SPTBN4Q9H254 RN7SL850P-201ENST00000579959 291 ntBASIC21.31■■□□□ 1
SPTBN4Q9H254 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.3■■□□□ 1
SPTBN4Q9H254 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPTBN4Q9H254 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.3■■□□□ 1
SPTBN4Q9H254 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTBN4Q9H254 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SPTBN4Q9H254 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTBN4Q9H254 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.3■■□□□ 1
SPTBN4Q9H254 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTBN4Q9H254 AC010536.3-201ENST00000620306 533 ntBASIC21.3■■□□□ 1
SPTBN4Q9H254 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPTBN4Q9H254 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.3■■□□□ 1
SPTBN4Q9H254 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.3■■□□□ 1
SPTBN4Q9H254 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTBN4Q9H254 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.3■■□□□ 1
SPTBN4Q9H254 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.3■■□□□ 1
SPTBN4Q9H254 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SPTBN4Q9H254 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPTBN4Q9H254 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.29■■□□□ 1
SPTBN4Q9H254 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SPTBN4Q9H254 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SPTBN4Q9H254 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.29■■□□□ 1
SPTBN4Q9H254 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.29■■□□□ 1
SPTBN4Q9H254 AC013268.1-206ENST00000638368 961 ntBASIC21.29■■□□□ 1
SPTBN4Q9H254 AC112229.1-201ENST00000639295 961 ntBASIC21.29■■□□□ 1
SPTBN4Q9H254 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPTBN4Q9H254 KRT18P35-201ENST00000510488 1269 ntBASIC21.29■■□□□ 1
SPTBN4Q9H254 AC097493.4-201ENST00000641197 219 ntBASIC21.29■■□□□ 1
SPTBN4Q9H254 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.28■■□□□ 1
SPTBN4Q9H254 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPTBN4Q9H254 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SPTBN4Q9H254 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.28■■□□□ 1
SPTBN4Q9H254 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.28■■□□□ 1
SPTBN4Q9H254 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPTBN4Q9H254 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.28■■□□□ 1
SPTBN4Q9H254 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.28■■□□□ 1
SPTBN4Q9H254 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTBN4Q9H254 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.27■■□□□ 1
SPTBN4Q9H254 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SPTBN4Q9H254 ARMC10P1-201ENST00000313754 855 ntBASIC21.27■■□□□ 1
SPTBN4Q9H254 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.27■■□□□ 1
SPTBN4Q9H254 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SPTBN4Q9H254 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.27■■□□□ 1
SPTBN4Q9H254 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPTBN4Q9H254 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SPTBN4Q9H254 MIPEPP3-201ENST00000412105 444 ntBASIC21.27■□□□□ 0.99
SPTBN4Q9H254 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.27■□□□□ 0.99
SPTBN4Q9H254 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.27■□□□□ 0.99
SPTBN4Q9H254 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.27■□□□□ 0.99
SPTBN4Q9H254 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SPTBN4Q9H254 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SPTBN4Q9H254 FP325331.1-202ENST00000623531 1380 ntBASIC21.26■□□□□ 0.99
SPTBN4Q9H254 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPTBN4Q9H254 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.26■□□□□ 0.99
SPTBN4Q9H254 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms