Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 AL031667.1-201ENST00000440222 725 ntBASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 ELOCP30-201ENST00000447108 299 ntBASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 OR52A4P-202ENST00000481634 799 ntBASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 RN7SL488P-201ENST00000585186 286 ntBASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
KRTAP3-3Q9BYR6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 TPTE2P6-202ENST00000445572 1007 ntBASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 NOC2LP1-201ENST00000450578 752 ntBASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 C3orf52-204ENST00000480282 1080 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 SMIM19-205ENST00000490331 487 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC13.37□□□□□ -0.27
KRTAP3-3Q9BYR6 AC139426.1-201ENST00000568218 2529 ntBASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 RN7SKP263-201ENST00000411194 309 ntBASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 AC009237.1-201ENST00000442127 744 ntBASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 AC008799.2-201ENST00000484429 647 ntBASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 PTPN20-222ENST00000509774 788 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 MVK-208ENST00000539696 608 ntTSL 5 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 AC090888.2-201ENST00000559765 1144 ntBASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 AL391834.1-201ENST00000609609 560 ntBASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KRTAP3-3Q9BYR6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 AL359873.1-201ENST00000447908 764 ntTSL 3 BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 TPRKBP1-201ENST00000456243 481 ntBASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 AC021146.10-201ENST00000515628 706 ntBASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 AC013400.1-201ENST00000607190 545 ntBASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 AC245008.1-201ENST00000608123 476 ntBASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 AP000553.2-201ENST00000609038 441 ntBASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 AP001033.2-201ENST00000609701 1003 ntBASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 AC006077.2-201ENST00000623591 457 ntBASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KRTAP3-3Q9BYR6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 AL589826.1-201ENST00000340697 249 ntBASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 AL133216.1-201ENST00000428915 727 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 NLGN4Y-AS1-201ENST00000434164 532 ntTSL 5 BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 LINC01830-201ENST00000450551 636 ntTSL 5 BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 RPP40P2-201ENST00000603596 712 ntBASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 FBXW7-212ENST00000604872 970 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 AL162233.1-201ENST00000620014 944 ntBASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 AC120036.2-201ENST00000509729 1474 ntBASIC13.34□□□□□ -0.27
KRTAP3-3Q9BYR6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
KRTAP3-3Q9BYR6 COX16-201ENST00000389912 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
KRTAP3-3Q9BYR6 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
KRTAP3-3Q9BYR6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms