Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SCAF11Q99590 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SCAF11Q99590 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
SCAF11Q99590 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
SCAF11Q99590 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SCAF11Q99590 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC31.85■■■□□ 2.69
SCAF11Q99590 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
SCAF11Q99590 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SCAF11Q99590 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC31.84■■■□□ 2.69
SCAF11Q99590 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
SCAF11Q99590 SLC7A5P2-201ENST00000553010 536 ntBASIC31.84■■■□□ 2.69
SCAF11Q99590 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SCAF11Q99590 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
SCAF11Q99590 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
SCAF11Q99590 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SCAF11Q99590 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
SCAF11Q99590 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
SCAF11Q99590 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.84■■■□□ 2.69
SCAF11Q99590 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC31.84■■■□□ 2.69
SCAF11Q99590 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SCAF11Q99590 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SCAF11Q99590 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC31.83■■■□□ 2.69
SCAF11Q99590 TSPY6P-201ENST00000448518 926 ntBASIC31.83■■■□□ 2.69
SCAF11Q99590 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.83■■■□□ 2.69
SCAF11Q99590 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC31.83■■■□□ 2.69
SCAF11Q99590 AL121832.2-201ENST00000610979 668 ntBASIC31.83■■■□□ 2.69
SCAF11Q99590 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SCAF11Q99590 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC31.82■■■□□ 2.68
SCAF11Q99590 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SCAF11Q99590 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SCAF11Q99590 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SCAF11Q99590 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.82■■■□□ 2.68
SCAF11Q99590 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC31.82■■■□□ 2.68
SCAF11Q99590 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.82■■■□□ 2.68
SCAF11Q99590 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SCAF11Q99590 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
SCAF11Q99590 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SCAF11Q99590 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.81■■■□□ 2.68
SCAF11Q99590 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.81■■■□□ 2.68
SCAF11Q99590 PARP1-210ENST00000629232 477 ntTSL 5 BASIC31.81■■■□□ 2.68
SCAF11Q99590 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SCAF11Q99590 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
SCAF11Q99590 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SCAF11Q99590 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SCAF11Q99590 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.8■■■□□ 2.68
SCAF11Q99590 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
SCAF11Q99590 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
SCAF11Q99590 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.8■■■□□ 2.68
SCAF11Q99590 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.8■■■□□ 2.68
SCAF11Q99590 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.8■■■□□ 2.68
SCAF11Q99590 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.8■■■□□ 2.68
SCAF11Q99590 LINC01124-201ENST00000409786 2117 ntBASIC31.8■■■□□ 2.68
SCAF11Q99590 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.8■■■□□ 2.68
SCAF11Q99590 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SCAF11Q99590 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
SCAF11Q99590 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.79■■■□□ 2.68
SCAF11Q99590 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SCAF11Q99590 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SCAF11Q99590 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SCAF11Q99590 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SCAF11Q99590 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SCAF11Q99590 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC31.78■■■□□ 2.68
SCAF11Q99590 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SCAF11Q99590 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC31.78■■■□□ 2.68
SCAF11Q99590 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
SCAF11Q99590 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SCAF11Q99590 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
SCAF11Q99590 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
SCAF11Q99590 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.78■■■□□ 2.68
SCAF11Q99590 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.78■■■□□ 2.68
SCAF11Q99590 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.77■■■□□ 2.68
SCAF11Q99590 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.77■■■□□ 2.68
SCAF11Q99590 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SCAF11Q99590 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.77■■■□□ 2.68
SCAF11Q99590 KLF13-207ENST00000560473 489 ntTSL 3 BASIC31.77■■■□□ 2.68
SCAF11Q99590 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.77■■■□□ 2.68
SCAF11Q99590 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
SCAF11Q99590 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.76■■■□□ 2.67
SCAF11Q99590 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.76■■■□□ 2.67
SCAF11Q99590 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.76■■■□□ 2.67
SCAF11Q99590 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.76■■■□□ 2.67
SCAF11Q99590 CPT2-209ENST00000636935 803 ntTSL 5 BASIC31.76■■■□□ 2.67
SCAF11Q99590 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
SCAF11Q99590 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC31.76■■■□□ 2.67
SCAF11Q99590 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SCAF11Q99590 AC144652.1-201ENST00000609974 1624 ntBASIC31.75■■■□□ 2.67
SCAF11Q99590 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SCAF11Q99590 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC31.75■■■□□ 2.67
SCAF11Q99590 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SCAF11Q99590 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms