Protein–RNA interactions for Protein: Q96RQ3

MCCC1, Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCC1Q96RQ3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MCCC1Q96RQ3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
MCCC1Q96RQ3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MCCC1Q96RQ3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.96■■□□□ 1.11
MCCC1Q96RQ3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
MCCC1Q96RQ3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 ZNRF2P3-201ENST00000424200 374 ntBASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 TSPY26P-201ENST00000476365 1326 ntBASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.95■■□□□ 1.1
MCCC1Q96RQ3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
MCCC1Q96RQ3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.93■■□□□ 1.1
MCCC1Q96RQ3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
MCCC1Q96RQ3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
MCCC1Q96RQ3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MCCC1Q96RQ3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.93■■□□□ 1.1
MCCC1Q96RQ3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.93■■□□□ 1.1
MCCC1Q96RQ3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
MCCC1Q96RQ3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MCCC1Q96RQ3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 C9orf163-202ENST00000624034 2573 ntBASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 AC010141.3-201ENST00000456659 717 ntBASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 AC087239.1-201ENST00000622671 572 ntBASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
MCCC1Q96RQ3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 AC087742.1-201ENST00000575880 1738 ntBASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
MCCC1Q96RQ3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MCCC1Q96RQ3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MCCC1Q96RQ3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MCCC1Q96RQ3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.89■■□□□ 1.1
MCCC1Q96RQ3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MCCC1Q96RQ3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MCCC1Q96RQ3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
MCCC1Q96RQ3 MIR572-201ENST00000384983 95 ntBASIC21.89■■□□□ 1.09
MCCC1Q96RQ3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.89■■□□□ 1.09
MCCC1Q96RQ3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MCCC1Q96RQ3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.88■■□□□ 1.09
MCCC1Q96RQ3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MCCC1Q96RQ3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MCCC1Q96RQ3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MCCC1Q96RQ3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MCCC1Q96RQ3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms