Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BBS4Q96RK4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BBS4Q96RK4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
BBS4Q96RK4 AC079834.2-201ENST00000609776 1949 ntBASIC20.72■□□□□ 0.91
BBS4Q96RK4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
BBS4Q96RK4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
BBS4Q96RK4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.72■□□□□ 0.91
BBS4Q96RK4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BBS4Q96RK4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BBS4Q96RK4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BBS4Q96RK4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BBS4Q96RK4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.71■□□□□ 0.91
BBS4Q96RK4 AC087742.1-201ENST00000575880 1738 ntBASIC20.71■□□□□ 0.91
BBS4Q96RK4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.71■□□□□ 0.91
BBS4Q96RK4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.71■□□□□ 0.91
BBS4Q96RK4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BBS4Q96RK4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.71■□□□□ 0.91
BBS4Q96RK4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.71■□□□□ 0.91
BBS4Q96RK4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BBS4Q96RK4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BBS4Q96RK4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.7■□□□□ 0.9
BBS4Q96RK4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BBS4Q96RK4 AC133637.1-201ENST00000624115 1537 ntBASIC20.7■□□□□ 0.9
BBS4Q96RK4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BBS4Q96RK4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BBS4Q96RK4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.7■□□□□ 0.9
BBS4Q96RK4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
BBS4Q96RK4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.7■□□□□ 0.9
BBS4Q96RK4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
BBS4Q96RK4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BBS4Q96RK4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BBS4Q96RK4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BBS4Q96RK4 AC242852.2-201ENST00000615738 1807 ntBASIC20.69■□□□□ 0.9
BBS4Q96RK4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
BBS4Q96RK4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BBS4Q96RK4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.69■□□□□ 0.9
BBS4Q96RK4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BBS4Q96RK4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.69■□□□□ 0.9
BBS4Q96RK4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.69■□□□□ 0.9
BBS4Q96RK4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.69■□□□□ 0.9
BBS4Q96RK4 MIR4466-201ENST00000606121 54 ntBASIC20.69■□□□□ 0.9
BBS4Q96RK4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.69■□□□□ 0.9
BBS4Q96RK4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BBS4Q96RK4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
BBS4Q96RK4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
BBS4Q96RK4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BBS4Q96RK4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BBS4Q96RK4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BBS4Q96RK4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BBS4Q96RK4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BBS4Q96RK4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BBS4Q96RK4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BBS4Q96RK4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
BBS4Q96RK4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BBS4Q96RK4 AC131281.2-201ENST00000520478 145 ntBASIC20.68■□□□□ 0.9
BBS4Q96RK4 MIR3181-201ENST00000578512 73 ntBASIC20.68■□□□□ 0.9
BBS4Q96RK4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.68■□□□□ 0.9
BBS4Q96RK4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BBS4Q96RK4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BBS4Q96RK4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BBS4Q96RK4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BBS4Q96RK4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.67■□□□□ 0.9
BBS4Q96RK4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.67■□□□□ 0.9
BBS4Q96RK4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 AC131212.1-201ENST00000613771 668 ntBASIC20.67■□□□□ 0.9
BBS4Q96RK4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 EP400NL-214ENST00000641289 2402 ntBASIC20.67■□□□□ 0.9
BBS4Q96RK4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.67■□□□□ 0.9
BBS4Q96RK4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BBS4Q96RK4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BBS4Q96RK4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BBS4Q96RK4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.66■□□□□ 0.9
BBS4Q96RK4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BBS4Q96RK4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BBS4Q96RK4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.66■□□□□ 0.9
BBS4Q96RK4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.66■□□□□ 0.9
BBS4Q96RK4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BBS4Q96RK4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS4Q96RK4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
BBS4Q96RK4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BBS4Q96RK4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BBS4Q96RK4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS4Q96RK4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS4Q96RK4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
BBS4Q96RK4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS4Q96RK4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS4Q96RK4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS4Q96RK4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.65■□□□□ 0.9
BBS4Q96RK4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
BBS4Q96RK4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.65■□□□□ 0.9
BBS4Q96RK4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.65■□□□□ 0.9
BBS4Q96RK4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms