Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN4Q96NZ1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN4Q96NZ1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.58■□□□□ 0.73
FOXN4Q96NZ1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN4Q96NZ1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN4Q96NZ1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN4Q96NZ1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
FOXN4Q96NZ1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN4Q96NZ1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN4Q96NZ1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 DUX4L4-201ENST00000566884 1269 ntBASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 ECEL1P1-201ENST00000373592 1742 ntBASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN4Q96NZ1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 ESRRAP2-201ENST00000418437 1549 ntBASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 PKD1P6-201ENST00000343738 4769 ntBASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 MIR638-201ENST00000385237 100 ntBASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 MIR4466-201ENST00000606121 54 ntBASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN4Q96NZ1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN4Q96NZ1 AC242852.2-201ENST00000615738 1807 ntBASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 AC127496.7-201ENST00000625110 1798 ntBASIC19.55■□□□□ 0.72
FOXN4Q96NZ1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 AC009086.3-201ENST00000623486 1008 ntBASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN4Q96NZ1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 MIR935-201ENST00000401179 91 ntBASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN4Q96NZ1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN4Q96NZ1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
FOXN4Q96NZ1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN4Q96NZ1 LINC01960-201ENST00000563759 1884 ntBASIC19.52■□□□□ 0.72
FOXN4Q96NZ1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms