Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHMP6Q96FZ7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHMP6Q96FZ7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22■■□□□ 1.11
CHMP6Q96FZ7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CHMP6Q96FZ7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 AC244015.2-201ENST00000616358 1861 ntBASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 AL157384.1-201ENST00000445995 2473 ntBASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 SPCS2P3-201ENST00000500401 656 ntBASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHMP6Q96FZ7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 AL592295.1-201ENST00000400984 884 ntBASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 MIR6765-201ENST00000614092 87 ntBASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 LINC01521-201ENST00000504184 1943 ntBASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHMP6Q96FZ7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 DUX4L9-201ENST00000449051 1259 ntBASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 ABHD17AP5-201ENST00000580133 923 ntBASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
CHMP6Q96FZ7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CHMP6Q96FZ7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHMP6Q96FZ7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHMP6Q96FZ7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHMP6Q96FZ7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHMP6Q96FZ7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CHMP6Q96FZ7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHMP6Q96FZ7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.95■■□□□ 1.1
CHMP6Q96FZ7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHMP6Q96FZ7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 RPS2P7-201ENST00000447334 885 ntBASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.93■■□□□ 1.1
CHMP6Q96FZ7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHMP6Q96FZ7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms