Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 SNX5-217ENST00000606557 1087 ntBASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 FAM99A-202ENST00000538190 1989 ntBASIC20.59■□□□□ 0.89
SLC47A1Q96FL8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC47A1Q96FL8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC47A1Q96FL8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC47A1Q96FL8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC47A1Q96FL8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC47A1Q96FL8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC47A1Q96FL8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC47A1Q96FL8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC47A1Q96FL8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC47A1Q96FL8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC47A1Q96FL8 AC010542.4-201ENST00000563151 1910 ntBASIC20.58■□□□□ 0.88
SLC47A1Q96FL8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SLC47A1Q96FL8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC47A1Q96FL8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC47A1Q96FL8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC47A1Q96FL8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC47A1Q96FL8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC47A1Q96FL8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.57■□□□□ 0.88
SLC47A1Q96FL8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC47A1Q96FL8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SLC47A1Q96FL8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.57■□□□□ 0.88
SLC47A1Q96FL8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC47A1Q96FL8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 BX664725.1-201ENST00000438252 379 ntBASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC47A1Q96FL8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC47A1Q96FL8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 AC021242.3-201ENST00000607598 1377 ntBASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC47A1Q96FL8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC47A1Q96FL8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC47A1Q96FL8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC47A1Q96FL8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC47A1Q96FL8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC47A1Q96FL8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC47A1Q96FL8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC47A1Q96FL8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC47A1Q96FL8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms