Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 BX842568.3-201ENST00000418104 571 ntBASIC18.67■□□□□ 0.58
RAB39BQ96DA2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 AC099791.1-201ENST00000416440 715 ntBASIC18.66■□□□□ 0.58
RAB39BQ96DA2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 AC233992.3-201ENST00000607491 485 ntBASIC18.66■□□□□ 0.58
RAB39BQ96DA2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 C9orf163-202ENST00000624034 2573 ntBASIC18.66■□□□□ 0.58
RAB39BQ96DA2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB39BQ96DA2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RAB39BQ96DA2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB39BQ96DA2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 RARRES2P6-201ENST00000567333 442 ntBASIC18.64■□□□□ 0.57
RAB39BQ96DA2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB39BQ96DA2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 FP325331.1-202ENST00000623531 1380 ntBASIC18.63■□□□□ 0.57
RAB39BQ96DA2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB39BQ96DA2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.62■□□□□ 0.57
RAB39BQ96DA2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 LINC00565-201ENST00000562710 2331 ntBASIC18.62■□□□□ 0.57
RAB39BQ96DA2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB39BQ96DA2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 AC126544.1-201ENST00000580842 1059 ntBASIC18.61■□□□□ 0.57
RAB39BQ96DA2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms