Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.38■□□□□ 0.69
USP9XQ93008 AC079140.4-201ENST00000507448 529 ntBASIC19.38■□□□□ 0.69
USP9XQ93008 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP9XQ93008 AC010331.1-201ENST00000611423 582 ntBASIC19.38■□□□□ 0.69
USP9XQ93008 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP9XQ93008 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP9XQ93008 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP9XQ93008 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP9XQ93008 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP9XQ93008 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
USP9XQ93008 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP9XQ93008 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.38■□□□□ 0.69
USP9XQ93008 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.38■□□□□ 0.69
USP9XQ93008 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.38■□□□□ 0.69
USP9XQ93008 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP9XQ93008 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP9XQ93008 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
USP9XQ93008 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP9XQ93008 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP9XQ93008 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP9XQ93008 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP9XQ93008 MYCNOS-205ENST00000641950 531 ntBASIC19.37■□□□□ 0.69
USP9XQ93008 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP9XQ93008 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
USP9XQ93008 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP9XQ93008 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.37■□□□□ 0.69
USP9XQ93008 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP9XQ93008 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.37■□□□□ 0.69
USP9XQ93008 AC006058.3-201ENST00000606217 1069 ntBASIC19.37■□□□□ 0.69
USP9XQ93008 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.36■□□□□ 0.69
USP9XQ93008 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP9XQ93008 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
USP9XQ93008 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP9XQ93008 RPS2P4-201ENST00000476944 856 ntBASIC19.36■□□□□ 0.69
USP9XQ93008 AC008550.1-201ENST00000511500 884 ntBASIC19.36■□□□□ 0.69
USP9XQ93008 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP9XQ93008 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.36■□□□□ 0.69
USP9XQ93008 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP9XQ93008 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
USP9XQ93008 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
USP9XQ93008 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
USP9XQ93008 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
USP9XQ93008 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP9XQ93008 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.36■□□□□ 0.69
USP9XQ93008 MIR4758-201ENST00000577688 71 ntBASIC19.36■□□□□ 0.69
USP9XQ93008 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.36■□□□□ 0.69
USP9XQ93008 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.35■□□□□ 0.69
USP9XQ93008 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.35■□□□□ 0.69
USP9XQ93008 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.35■□□□□ 0.69
USP9XQ93008 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP9XQ93008 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
USP9XQ93008 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.35■□□□□ 0.69
USP9XQ93008 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.35■□□□□ 0.69
USP9XQ93008 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.35■□□□□ 0.69
USP9XQ93008 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.34■□□□□ 0.69
USP9XQ93008 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP9XQ93008 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP9XQ93008 ESRRAP1-201ENST00000400596 1257 ntBASIC19.34■□□□□ 0.69
USP9XQ93008 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.34■□□□□ 0.69
USP9XQ93008 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.34■□□□□ 0.69
USP9XQ93008 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.34■□□□□ 0.69
USP9XQ93008 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
USP9XQ93008 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.34■□□□□ 0.69
USP9XQ93008 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
USP9XQ93008 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.34■□□□□ 0.69
USP9XQ93008 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
USP9XQ93008 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP9XQ93008 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP9XQ93008 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.34■□□□□ 0.69
USP9XQ93008 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.34■□□□□ 0.69
USP9XQ93008 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.34■□□□□ 0.69
USP9XQ93008 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP9XQ93008 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.33■□□□□ 0.69
USP9XQ93008 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
USP9XQ93008 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.33■□□□□ 0.69
USP9XQ93008 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.33■□□□□ 0.69
USP9XQ93008 RARRES2P4-201ENST00000514074 484 ntBASIC19.33■□□□□ 0.69
USP9XQ93008 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
USP9XQ93008 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP9XQ93008 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
USP9XQ93008 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP9XQ93008 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.33■□□□□ 0.68
USP9XQ93008 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP9XQ93008 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP9XQ93008 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.33■□□□□ 0.68
USP9XQ93008 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.33■□□□□ 0.68
USP9XQ93008 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
USP9XQ93008 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP9XQ93008 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.32■□□□□ 0.68
USP9XQ93008 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.32■□□□□ 0.68
USP9XQ93008 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms