Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB3Q92617 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NPIPB3Q92617 LINC01960-201ENST00000563759 1884 ntBASIC17.24■□□□□ 0.35
NPIPB3Q92617 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NPIPB3Q92617 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB3Q92617 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB3Q92617 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB3Q92617 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB3Q92617 DUX4L4-201ENST00000566884 1269 ntBASIC17.24■□□□□ 0.35
NPIPB3Q92617 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB3Q92617 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NPIPB3Q92617 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB3Q92617 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB3Q92617 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NPIPB3Q92617 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.23■□□□□ 0.35
NPIPB3Q92617 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.23■□□□□ 0.35
NPIPB3Q92617 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPB3Q92617 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPB3Q92617 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NPIPB3Q92617 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB3Q92617 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPB3Q92617 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB3Q92617 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NPIPB3Q92617 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB3Q92617 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
NPIPB3Q92617 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.22■□□□□ 0.35
NPIPB3Q92617 AC092028.1-203ENST00000608262 953 ntBASIC17.22■□□□□ 0.35
NPIPB3Q92617 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.22■□□□□ 0.35
NPIPB3Q92617 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB3Q92617 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB3Q92617 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB3Q92617 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.22■□□□□ 0.35
NPIPB3Q92617 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
NPIPB3Q92617 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB3Q92617 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NPIPB3Q92617 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB3Q92617 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB3Q92617 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB3Q92617 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB3Q92617 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB3Q92617 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB3Q92617 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPB3Q92617 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB3Q92617 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NPIPB3Q92617 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB3Q92617 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.21■□□□□ 0.35
NPIPB3Q92617 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NPIPB3Q92617 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB3Q92617 KRT125P-201ENST00000546827 989 ntBASIC17.21■□□□□ 0.35
NPIPB3Q92617 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NPIPB3Q92617 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.21■□□□□ 0.35
NPIPB3Q92617 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPB3Q92617 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB3Q92617 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB3Q92617 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB3Q92617 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB3Q92617 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB3Q92617 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB3Q92617 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB3Q92617 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPIPB3Q92617 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB3Q92617 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPB3Q92617 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB3Q92617 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB3Q92617 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB3Q92617 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPB3Q92617 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB3Q92617 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.19■□□□□ 0.34
NPIPB3Q92617 AC009102.2-201ENST00000606772 1639 ntBASIC17.19■□□□□ 0.34
NPIPB3Q92617 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB3Q92617 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPB3Q92617 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NPIPB3Q92617 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB3Q92617 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.19■□□□□ 0.34
NPIPB3Q92617 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB3Q92617 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPB3Q92617 AL137060.1-201ENST00000618151 2648 ntBASIC17.18■□□□□ 0.34
NPIPB3Q92617 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPB3Q92617 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPB3Q92617 AC004687.1-201ENST00000579003 1625 ntBASIC17.18■□□□□ 0.34
NPIPB3Q92617 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms