Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 MIR4466-201ENST00000606121 54 ntBASIC20.16■□□□□ 0.82
CNOT9Q92600 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT9Q92600 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.16■□□□□ 0.82
CNOT9Q92600 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.16■□□□□ 0.82
CNOT9Q92600 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT9Q92600 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT9Q92600 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.16■□□□□ 0.82
CNOT9Q92600 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CNOT9Q92600 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CNOT9Q92600 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
CNOT9Q92600 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CNOT9Q92600 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CNOT9Q92600 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.15■□□□□ 0.82
CNOT9Q92600 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT9Q92600 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.15■□□□□ 0.82
CNOT9Q92600 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CNOT9Q92600 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT9Q92600 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT9Q92600 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT9Q92600 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT9Q92600 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CNOT9Q92600 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CNOT9Q92600 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CNOT9Q92600 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT9Q92600 AC139530.1-201ENST00000575312 1977 ntBASIC20.14■□□□□ 0.81
CNOT9Q92600 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CNOT9Q92600 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CNOT9Q92600 AC133637.1-201ENST00000624115 1537 ntBASIC20.14■□□□□ 0.81
CNOT9Q92600 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.14■□□□□ 0.81
CNOT9Q92600 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT9Q92600 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT9Q92600 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNOT9Q92600 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.14■□□□□ 0.81
CNOT9Q92600 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CNOT9Q92600 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT9Q92600 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT9Q92600 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT9Q92600 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT9Q92600 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT9Q92600 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT9Q92600 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.13■□□□□ 0.81
CNOT9Q92600 AC131281.2-201ENST00000520478 145 ntBASIC20.13■□□□□ 0.81
CNOT9Q92600 MIR3181-201ENST00000578512 73 ntBASIC20.13■□□□□ 0.81
CNOT9Q92600 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT9Q92600 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.13■□□□□ 0.81
CNOT9Q92600 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT9Q92600 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT9Q92600 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT9Q92600 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT9Q92600 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CNOT9Q92600 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CNOT9Q92600 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CNOT9Q92600 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.12■□□□□ 0.81
CNOT9Q92600 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.12■□□□□ 0.81
CNOT9Q92600 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.12■□□□□ 0.81
CNOT9Q92600 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT9Q92600 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT9Q92600 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT9Q92600 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT9Q92600 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.11■□□□□ 0.81
CNOT9Q92600 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT9Q92600 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CNOT9Q92600 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.11■□□□□ 0.81
CNOT9Q92600 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CNOT9Q92600 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CNOT9Q92600 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.1■□□□□ 0.81
CNOT9Q92600 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.1■□□□□ 0.81
CNOT9Q92600 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CNOT9Q92600 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT9Q92600 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT9Q92600 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT9Q92600 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms