Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 LINC01960-201ENST00000563759 1884 ntBASIC21.76■■□□□ 1.07
CKAP2Q8WWK9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.76■■□□□ 1.07
CKAP2Q8WWK9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CKAP2Q8WWK9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.76■■□□□ 1.07
CKAP2Q8WWK9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.76■■□□□ 1.07
CKAP2Q8WWK9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 Z98882.1-201ENST00000622160 2253 ntBASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 DUX4L9-201ENST00000449051 1259 ntBASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CKAP2Q8WWK9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 AF131216.4-201ENST00000638924 1588 ntBASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 LINC01521-201ENST00000504184 1943 ntBASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.74■■□□□ 1.07
CKAP2Q8WWK9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 FEM1AP4-201ENST00000443167 1987 ntBASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CKAP2Q8WWK9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 AF106564.1-201ENST00000607058 2553 ntBASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CKAP2Q8WWK9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CKAP2Q8WWK9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.7■■□□□ 1.06
CKAP2Q8WWK9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 AC022616.5-201ENST00000518796 181 ntBASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CKAP2Q8WWK9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms