Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 AC003957.1-201ENST00000625108 2673 ntBASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRUB1Q8WWH5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TRUB1Q8WWH5 AC144652.1-201ENST00000609974 1624 ntBASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.02■□□□□ 0.8
TRUB1Q8WWH5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRUB1Q8WWH5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.02■□□□□ 0.79
TRUB1Q8WWH5 AL391422.3-201ENST00000603791 2761 ntBASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 AF131216.4-201ENST00000638924 1588 ntBASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRUB1Q8WWH5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRUB1Q8WWH5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRUB1Q8WWH5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRUB1Q8WWH5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20■□□□□ 0.79
TRUB1Q8WWH5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRUB1Q8WWH5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRUB1Q8WWH5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20■□□□□ 0.79
TRUB1Q8WWH5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRUB1Q8WWH5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 AC129492.7-201ENST00000622992 756 ntBASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.99■□□□□ 0.79
TRUB1Q8WWH5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB1Q8WWH5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms