Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF139Q8WU17 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF139Q8WU17 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF139Q8WU17 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF139Q8WU17 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RNF139Q8WU17 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF139Q8WU17 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.98■■□□□ 1.27
RNF139Q8WU17 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF139Q8WU17 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RNF139Q8WU17 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RNF139Q8WU17 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RNF139Q8WU17 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF139Q8WU17 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF139Q8WU17 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF139Q8WU17 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
RNF139Q8WU17 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
RNF139Q8WU17 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RNF139Q8WU17 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF139Q8WU17 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF139Q8WU17 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RNF139Q8WU17 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF139Q8WU17 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF139Q8WU17 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.97■■□□□ 1.27
RNF139Q8WU17 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF139Q8WU17 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF139Q8WU17 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RNF139Q8WU17 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF139Q8WU17 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF139Q8WU17 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF139Q8WU17 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF139Q8WU17 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF139Q8WU17 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF139Q8WU17 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF139Q8WU17 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF139Q8WU17 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 ZNRF2P3-201ENST00000424200 374 ntBASIC22.96■■□□□ 1.27
RNF139Q8WU17 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 AP005435.1-201ENST00000529293 1178 ntBASIC22.96■■□□□ 1.27
RNF139Q8WU17 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF139Q8WU17 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF139Q8WU17 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF139Q8WU17 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF139Q8WU17 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF139Q8WU17 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF139Q8WU17 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF139Q8WU17 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF139Q8WU17 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF139Q8WU17 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF139Q8WU17 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF139Q8WU17 TSPY26P-201ENST00000476365 1326 ntBASIC22.95■■□□□ 1.26
RNF139Q8WU17 IGHV3-19-201ENST00000521488 291 ntBASIC22.95■■□□□ 1.26
RNF139Q8WU17 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF139Q8WU17 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF139Q8WU17 AC068587.7-201ENST00000641602 218 ntBASIC22.95■■□□□ 1.26
RNF139Q8WU17 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.94■■□□□ 1.26
RNF139Q8WU17 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF139Q8WU17 AC012676.1-201ENST00000574705 1949 ntBASIC22.94■■□□□ 1.26
RNF139Q8WU17 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RNF139Q8WU17 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF139Q8WU17 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF139Q8WU17 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF139Q8WU17 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF139Q8WU17 C1orf229-201ENST00000623686 2258 ntBASIC22.94■■□□□ 1.26
RNF139Q8WU17 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RNF139Q8WU17 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF139Q8WU17 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF139Q8WU17 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF139Q8WU17 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF139Q8WU17 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF139Q8WU17 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF139Q8WU17 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF139Q8WU17 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF139Q8WU17 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RNF139Q8WU17 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF139Q8WU17 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF139Q8WU17 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF139Q8WU17 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF139Q8WU17 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF139Q8WU17 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF139Q8WU17 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF139Q8WU17 AC087239.1-201ENST00000622671 572 ntBASIC22.92■■□□□ 1.26
RNF139Q8WU17 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF139Q8WU17 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF139Q8WU17 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF139Q8WU17 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
RNF139Q8WU17 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF139Q8WU17 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
RNF139Q8WU17 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF139Q8WU17 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF139Q8WU17 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF139Q8WU17 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
RNF139Q8WU17 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
RNF139Q8WU17 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms