Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 HLA-L-209ENST00000420110 1011 ntBASIC19.07■□□□□ 0.64
LINC01560Q8TB33 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 SMUG1P1-201ENST00000590640 811 ntBASIC19.07■□□□□ 0.64
LINC01560Q8TB33 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01560Q8TB33 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LINC01560Q8TB33 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC01560Q8TB33 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 CDCA4P2-201ENST00000441182 718 ntBASIC19.04■□□□□ 0.64
LINC01560Q8TB33 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01560Q8TB33 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01560Q8TB33 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01560Q8TB33 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LINC01560Q8TB33 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01560Q8TB33 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC01560Q8TB33 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.03■□□□□ 0.64
LINC01560Q8TB33 AC073111.5-205ENST00000641717 521 ntBASIC19.03■□□□□ 0.64
LINC01560Q8TB33 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01560Q8TB33 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01560Q8TB33 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.02■□□□□ 0.64
LINC01560Q8TB33 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01560Q8TB33 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.01■□□□□ 0.63
LINC01560Q8TB33 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
LINC01560Q8TB33 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01560Q8TB33 KRT19P1-201ENST00000405746 1186 ntBASIC19.01■□□□□ 0.63
LINC01560Q8TB33 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.01■□□□□ 0.63
LINC01560Q8TB33 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.01■□□□□ 0.63
LINC01560Q8TB33 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LINC01560Q8TB33 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.01■□□□□ 0.63
LINC01560Q8TB33 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01560Q8TB33 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01560Q8TB33 OXCT2P1-201ENST00000447263 1535 ntBASIC19■□□□□ 0.63
LINC01560Q8TB33 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LINC01560Q8TB33 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01560Q8TB33 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01560Q8TB33 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19■□□□□ 0.63
LINC01560Q8TB33 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01560Q8TB33 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01560Q8TB33 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01560Q8TB33 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms