Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF1Q8NEP3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF1Q8NEP3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.2■□□□□ 0.66
DNAAF1Q8NEP3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.2■□□□□ 0.66
DNAAF1Q8NEP3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.2■□□□□ 0.66
DNAAF1Q8NEP3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF1Q8NEP3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF1Q8NEP3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNAAF1Q8NEP3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 SLC25A24-204ENST00000569674 2357 ntBASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 MIR6722-201ENST00000617286 78 ntBASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNAAF1Q8NEP3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 AC021242.3-201ENST00000607598 1377 ntBASIC19.18■□□□□ 0.66
DNAAF1Q8NEP3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNAAF1Q8NEP3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DNAAF1Q8NEP3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.17■□□□□ 0.66
DNAAF1Q8NEP3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNAAF1Q8NEP3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.17■□□□□ 0.66
DNAAF1Q8NEP3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.17■□□□□ 0.66
DNAAF1Q8NEP3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNAAF1Q8NEP3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 BX664725.1-201ENST00000438252 379 ntBASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNAAF1Q8NEP3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 AC144652.1-201ENST00000609974 1624 ntBASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 AC005703.6-201ENST00000623265 1329 ntBASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNAAF1Q8NEP3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
DNAAF1Q8NEP3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
DNAAF1Q8NEP3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNAAF1Q8NEP3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DNAAF1Q8NEP3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms