Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SHCBP1Q8NEM2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.1■■□□□ 1.61
SHCBP1Q8NEM2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.1■■□□□ 1.61
SHCBP1Q8NEM2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.1■■□□□ 1.61
SHCBP1Q8NEM2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHCBP1Q8NEM2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SHCBP1Q8NEM2 AC004812.2-201ENST00000611079 2094 ntBASIC25.09■■□□□ 1.61
SHCBP1Q8NEM2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SHCBP1Q8NEM2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHCBP1Q8NEM2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.09■■□□□ 1.61
SHCBP1Q8NEM2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHCBP1Q8NEM2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SHCBP1Q8NEM2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHCBP1Q8NEM2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.08■■□□□ 1.61
SHCBP1Q8NEM2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.08■■□□□ 1.61
SHCBP1Q8NEM2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHCBP1Q8NEM2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.08■■□□□ 1.61
SHCBP1Q8NEM2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHCBP1Q8NEM2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.08■■□□□ 1.61
SHCBP1Q8NEM2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SHCBP1Q8NEM2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
SHCBP1Q8NEM2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.08■■□□□ 1.6
SHCBP1Q8NEM2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 AL139125.2-201ENST00000623134 1869 ntBASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 KRT18P11-201ENST00000435214 1283 ntBASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHCBP1Q8NEM2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.06■■□□□ 1.6
SHCBP1Q8NEM2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.06■■□□□ 1.6
SHCBP1Q8NEM2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.06■■□□□ 1.6
SHCBP1Q8NEM2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
SHCBP1Q8NEM2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
SHCBP1Q8NEM2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHCBP1Q8NEM2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.05■■□□□ 1.6
SHCBP1Q8NEM2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
SHCBP1Q8NEM2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHCBP1Q8NEM2 AC079140.4-201ENST00000507448 529 ntBASIC25.05■■□□□ 1.6
SHCBP1Q8NEM2 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.05■■□□□ 1.6
SHCBP1Q8NEM2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
SHCBP1Q8NEM2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.05■■□□□ 1.6
SHCBP1Q8NEM2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHCBP1Q8NEM2 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.04■■□□□ 1.6
SHCBP1Q8NEM2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.04■■□□□ 1.6
SHCBP1Q8NEM2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHCBP1Q8NEM2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SHCBP1Q8NEM2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHCBP1Q8NEM2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHCBP1Q8NEM2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHCBP1Q8NEM2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SHCBP1Q8NEM2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SHCBP1Q8NEM2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.03■■□□□ 1.6
SHCBP1Q8NEM2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.03■■□□□ 1.6
SHCBP1Q8NEM2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.03■■□□□ 1.6
SHCBP1Q8NEM2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
SHCBP1Q8NEM2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHCBP1Q8NEM2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHCBP1Q8NEM2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHCBP1Q8NEM2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHCBP1Q8NEM2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.02■■□□□ 1.6
SHCBP1Q8NEM2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.02■■□□□ 1.6
SHCBP1Q8NEM2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
SHCBP1Q8NEM2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 CROCCP5-201ENST00000436658 830 ntBASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHCBP1Q8NEM2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 MAP2K4P1-201ENST00000438453 1195 ntBASIC25■■□□□ 1.59
SHCBP1Q8NEM2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 AC104771.1-201ENST00000603335 964 ntBASIC25■■□□□ 1.59
SHCBP1Q8NEM2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 AC011767.1-201ENST00000617410 1153 ntBASIC25■■□□□ 1.59
SHCBP1Q8NEM2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 ESRRAP2-201ENST00000418437 1549 ntBASIC25■■□□□ 1.59
SHCBP1Q8NEM2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25■■□□□ 1.59
SHCBP1Q8NEM2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms