Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGP1Q8N7R0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.52■□□□□ 0.72
NANOGP1Q8N7R0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGP1Q8N7R0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGP1Q8N7R0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.52■□□□□ 0.72
NANOGP1Q8N7R0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.52■□□□□ 0.71
NANOGP1Q8N7R0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NANOGP1Q8N7R0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 MIR4449-201ENST00000578365 66 ntBASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 LINC01529-204ENST00000636474 1715 ntBASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGP1Q8N7R0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGP1Q8N7R0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 AC129492.7-201ENST00000622992 756 ntBASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGP1Q8N7R0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.48■□□□□ 0.71
NANOGP1Q8N7R0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 FP325331.1-202ENST00000623531 1380 ntBASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 MIR4281-201ENST00000580852 62 ntBASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 Z98882.1-201ENST00000622160 2253 ntBASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGP1Q8N7R0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.46■□□□□ 0.71
NANOGP1Q8N7R0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms