Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARHGEF39Q8N4T4 AC087742.1-201ENST00000575880 1738 ntBASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 AC010141.3-201ENST00000456659 717 ntBASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ARHGEF39Q8N4T4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.74■□□□□ 0.91
ARHGEF39Q8N4T4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF39Q8N4T4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 C9orf163-202ENST00000624034 2573 ntBASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 OXCT2P1-201ENST00000447263 1535 ntBASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF39Q8N4T4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 AC026271.2-201ENST00000428091 497 ntBASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF39Q8N4T4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ARHGEF39Q8N4T4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 AC012414.1-201ENST00000556676 535 ntBASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF39Q8N4T4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARHGEF39Q8N4T4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ARHGEF39Q8N4T4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.69■□□□□ 0.9
ARHGEF39Q8N4T4 AL358852.1-201ENST00000623174 1268 ntBASIC20.69■□□□□ 0.9
ARHGEF39Q8N4T4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARHGEF39Q8N4T4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARHGEF39Q8N4T4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ARHGEF39Q8N4T4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.69■□□□□ 0.9
ARHGEF39Q8N4T4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms