Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 TSPY20P-201ENST00000450910 630 ntBASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 AC083906.2-201ENST00000511578 360 ntBASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 AC087239.1-201ENST00000622671 572 ntBASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 AC066615.1-201ENST00000640911 628 ntBASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 MFSD11-216ENST00000590393 1141 ntBASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 AL121832.2-201ENST00000610979 668 ntBASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SLC44A3Q8N4M1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 AL050303.2-201ENST00000619798 666 ntBASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC44A3Q8N4M1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC44A3Q8N4M1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SLC44A3Q8N4M1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC44A3Q8N4M1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SLC44A3Q8N4M1 TSPY6P-201ENST00000448518 926 ntBASIC22.58■■□□□ 1.21
SLC44A3Q8N4M1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.58■■□□□ 1.21
SLC44A3Q8N4M1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC44A3Q8N4M1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.58■■□□□ 1.21
SLC44A3Q8N4M1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
SLC44A3Q8N4M1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.58■■□□□ 1.2
SLC44A3Q8N4M1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SLC44A3Q8N4M1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.58■■□□□ 1.2
SLC44A3Q8N4M1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC44A3Q8N4M1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC44A3Q8N4M1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC44A3Q8N4M1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
SLC44A3Q8N4M1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC44A3Q8N4M1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.57■■□□□ 1.2
SLC44A3Q8N4M1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC44A3Q8N4M1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 KRT18P6-201ENST00000555540 1265 ntBASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 OXCT2P1-201ENST00000447263 1535 ntBASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC44A3Q8N4M1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 AC231657.2-201ENST00000624556 255 ntBASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC44A3Q8N4M1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC44A3Q8N4M1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC44A3Q8N4M1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms