Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.7■■□□□ 1.38
LRRC43Q8N309 KRT18P61-201ENST00000585825 1298 ntBASIC23.7■■□□□ 1.38
LRRC43Q8N309 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.7■■□□□ 1.38
LRRC43Q8N309 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC43Q8N309 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC43Q8N309 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.7■■□□□ 1.38
LRRC43Q8N309 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
LRRC43Q8N309 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.69■■□□□ 1.38
LRRC43Q8N309 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC43Q8N309 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.69■■□□□ 1.38
LRRC43Q8N309 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.69■■□□□ 1.38
LRRC43Q8N309 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
LRRC43Q8N309 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC43Q8N309 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC43Q8N309 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC43Q8N309 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
LRRC43Q8N309 BX005040.4-201ENST00000637145 1518 ntBASIC23.69■■□□□ 1.38
LRRC43Q8N309 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC43Q8N309 AC004812.2-201ENST00000611079 2094 ntBASIC23.68■■□□□ 1.38
LRRC43Q8N309 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC43Q8N309 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC43Q8N309 AC006015.1-201ENST00000429970 570 ntBASIC23.68■■□□□ 1.38
LRRC43Q8N309 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.68■■□□□ 1.38
LRRC43Q8N309 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC43Q8N309 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.68■■□□□ 1.38
LRRC43Q8N309 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.68■■□□□ 1.38
LRRC43Q8N309 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.68■■□□□ 1.38
LRRC43Q8N309 AL353803.4-201ENST00000565882 1934 ntBASIC23.68■■□□□ 1.38
LRRC43Q8N309 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC43Q8N309 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.68■■□□□ 1.38
LRRC43Q8N309 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC43Q8N309 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC43Q8N309 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
LRRC43Q8N309 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
LRRC43Q8N309 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC43Q8N309 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC43Q8N309 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.67■■□□□ 1.38
LRRC43Q8N309 AC010141.3-201ENST00000456659 717 ntBASIC23.67■■□□□ 1.38
LRRC43Q8N309 AC137761.2-201ENST00000561729 223 ntBASIC23.67■■□□□ 1.38
LRRC43Q8N309 AC145350.3-201ENST00000569033 163 ntBASIC23.67■■□□□ 1.38
LRRC43Q8N309 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
LRRC43Q8N309 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
LRRC43Q8N309 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.67■■□□□ 1.38
LRRC43Q8N309 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC43Q8N309 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
LRRC43Q8N309 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC43Q8N309 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
LRRC43Q8N309 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC43Q8N309 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC43Q8N309 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC43Q8N309 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.66■■□□□ 1.38
LRRC43Q8N309 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.66■■□□□ 1.38
LRRC43Q8N309 AC016769.1-201ENST00000409132 1010 ntBASIC23.66■■□□□ 1.38
LRRC43Q8N309 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.66■■□□□ 1.38
LRRC43Q8N309 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC43Q8N309 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC43Q8N309 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
LRRC43Q8N309 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC43Q8N309 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC43Q8N309 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
LRRC43Q8N309 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC43Q8N309 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LRRC43Q8N309 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC43Q8N309 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC43Q8N309 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
LRRC43Q8N309 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
LRRC43Q8N309 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.64■■□□□ 1.38
LRRC43Q8N309 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.64■■□□□ 1.38
LRRC43Q8N309 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.64■■□□□ 1.38
LRRC43Q8N309 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.37
LRRC43Q8N309 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC43Q8N309 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
LRRC43Q8N309 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.64■■□□□ 1.37
LRRC43Q8N309 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.64■■□□□ 1.37
LRRC43Q8N309 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC43Q8N309 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC43Q8N309 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.64■■□□□ 1.37
LRRC43Q8N309 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC43Q8N309 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRC43Q8N309 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRC43Q8N309 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.63■■□□□ 1.37
LRRC43Q8N309 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.63■■□□□ 1.37
LRRC43Q8N309 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.63■■□□□ 1.37
LRRC43Q8N309 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRC43Q8N309 SMUG1P1-201ENST00000590640 811 ntBASIC23.63■■□□□ 1.37
LRRC43Q8N309 AC080038.1-201ENST00000611274 1154 ntBASIC23.63■■□□□ 1.37
LRRC43Q8N309 AP004607.4-201ENST00000530158 1459 ntBASIC23.62■■□□□ 1.37
LRRC43Q8N309 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.62■■□□□ 1.37
LRRC43Q8N309 AC004854.2-201ENST00000608450 1441 ntBASIC23.62■■□□□ 1.37
LRRC43Q8N309 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC43Q8N309 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
LRRC43Q8N309 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC43Q8N309 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC43Q8N309 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.62■■□□□ 1.37
LRRC43Q8N309 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC43Q8N309 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC43Q8N309 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.62■■□□□ 1.37
LRRC43Q8N309 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC43Q8N309 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.62■■□□□ 1.37
LRRC43Q8N309 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms